RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 GUCA1CO95843 209 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ASNSP08243 561 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 KRT13P13646 458 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 XRCC1P18887 633 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 PTMSP20962 102 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CALB2P22676 271 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ZBTB25P24278 435 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 IGLV3-21P80748 117 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 VLDLRP98155 873 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 BCL2L1Q07817 233 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ATXN7L3Q14CW9 347 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CELF3Q5SZQ8 465 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 DCST2Q5T1A1 773 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 UTF1Q5T230 341 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 RIPPLY2Q5TAB7 128 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 UFSP1Q6NVU6 142 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 STAC2Q6ZMT1 411 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MOB1BQ7L9L4 216 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 APTXQ7Z2E3 356 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ANKRD37Q7Z713 158 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 KIAA1328Q86T90 577 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 FBXO16Q8IX29 292 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 C9orf40Q8IXQ3 194 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MTURNQ8N3F0 131 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 FADS6Q8N9I5 356 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 OR13F1Q8NGS4 319 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 OR9A4Q8NGU2 314 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 THRSPQ92748 146 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MS4A14Q96JA4 679 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 C4orf36Q96KX1 117 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CNOT6LQ96LI5 555 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MAGEB18Q96M61 343 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 TESK2Q96S53 571 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 GPA33Q99795 319 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 DPH7Q9BTV6 452 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 TPPP3Q9BW30 176 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 DUSP16Q9BY84 665 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MRPL13Q9BYD1 178 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 RIBC2Q9H4K1 309 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 PALMDQ9NP74 551 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 NANSQ9NR45 359 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 SLC35D1Q9NTN3 355 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 B4GALT7Q9UBV7 327 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 Q9UF83 564 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CYTH4Q9UIA0 394 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 SH3BGRL2Q9UJC5 107 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ANAPC7Q9UJX3 599 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 SPACA6W5XKT8 324 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ZBED9Q6R2W3 1325 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 NUP155O75694 1391 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 METP08581 1390 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 USP47Q96K76 1375 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 KIF15Q9NS87 1388 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 PTPRTO14522 1441 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 A2MP01023 1474 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 FER1L5A0AVI2 2057 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 TRPM2O94759 1503 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 ZFYVE16Q7Z3T8 1539 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 LMTK2Q8IWU2 1503 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MROH1Q8NDA8 1641 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MYO3AQ8NEV4 1616 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MYOM1P52179 1685 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PPLO60437 1756 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CFAP65Q6ZU64 1925 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PPIAL4CA0A0B4J2A2 164 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 FAM220BPB1ANY3 271 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 WWP2O00308 870 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 OR7A17O14581 309 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 EFNA2O43921 213 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PEX11AO75192 247 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ZNF254O75437 659 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SCRG1O75711 98 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 TM7SF2O76062 418 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 UFL1O94874 794 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 LY6G6DO95868 133 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CHRNA1P02708 482 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KRT6BP04259 564 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 GIG44P09565 113 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PPIAL4GP0DN37 164 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CLUP10909 449 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SERPINA2P20848 420 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ATP6V1C1P21283 382 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 VDAC1P21796 283 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ADORA2BP29275 332 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 EPHX2P34913 555 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 GCKP35557 465 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 BDKRB1P46663 353 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 RPL29P47914 159 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KRT6CP48668 564 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MEOX2P50222 304 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SLC26A2P50443 739 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 LIM2P55344 173 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 OTUD4Q01804 1114 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KLHL30Q0D2K2 578 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ST3GAL3Q11203 375 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KIAA0040Q15053 153 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 RNF212Q495C1 297 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM52BQ4KMG9 183 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 LINC01620Q4KN68 170 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 DNAJC21Q5F1R6 531 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms