RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 RAB38P57729 211 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 FHL5Q5TD97 284 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 AGAP7PQ5VUJ5 663 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 THSD4Q6ZMP0 1018 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 SPATC1Q76KD6 591 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 RNF44Q7L0R7 432 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 DTX3Q8N9I9 347 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 RFKQ969G6 155 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 EFHD2Q96C19 240 aaPredicted RBP10.14□□□□□ -0.79
DDX56-203ENST00000421223 AHCYL2Q96HN2 611 aaKnown RBP10.14□□□□□ -0.79
DDX56-203ENST00000421223 LMF1Q96S06 567 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 TAPBPLQ9BX59 468 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 HCAR1Q9BXC0 346 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 SMURF1Q9HCE7 757 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 KRCC1Q9NPI7 259 aaPredicted RBP10.14□□□□□ -0.79
DDX56-203ENST00000421223 LRIT1Q9P2V4 623 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 COMMD3Q9UBI1 195 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 TESQ9UGI8 421 aaKnown RBP10.14□□□□□ -0.79
DDX56-203ENST00000421223 FBXL4Q9UKA2 621 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 PRELID1Q9Y255 219 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 MED31Q9Y3C7 131 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 PCDHGB6Q9Y5F9 930 aa10.14□□□□□ -0.79
DDX56-203ENST00000421223 IGHV5-51A0A0C4DH38 117 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CLDN4O14493 209 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CASKO14936 926 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 ADAM11O75078 769 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 BMP8BP34820 402 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SLC1A3P43003 542 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 EIF2B2P49770 351 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 PSG6Q00889 435 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CRYZQ08257 329 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 MGAT2Q10469 447 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 RAB40BQ12829 278 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 MLLT11Q13015 90 aaPredicted RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 POMZP3Q6PJE2 187 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 TTLL10Q6ZVT0 673 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 BMP8AQ7Z5Y6 402 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 OAFQ86UD1 273 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 C10orf53Q8N6V4 93 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SPRYD4Q8WW59 207 aaPredicted RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 UFD1Q92890 307 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 HSPA12BQ96MM6 686 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 TNFRSF13CQ96RJ3 184 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 PRSS27Q9BQR3 290 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SLC30A2Q9BRI3 323 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 NXF2Q9GZY0 626 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 FOLH1BQ9HBA9 442 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 DUSP22Q9NRW4 184 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 RPS6KB2Q9UBS0 482 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CDH10Q9Y6N8 788 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 IGHV1OR15-9A0A0B4J2B8 117 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 HYKKA2RU49 373 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CDC14CA4D256 554 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 C12orf71A8MTZ7 269 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SLC30A4O14863 429 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 RFPL3O75679 317 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 PPP1R3DO95685 299 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 IGKV1D-16P01601 117 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SLC35E2P0CK97 266 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 SPNP16150 400 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 CCR5P51681 352 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 FAM53BQ14153 422 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 ELOCQ15369 112 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 ALG10BQ5I7T1 473 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 RCBTB1Q8NDN9 531 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 HS6ST2Q96MM7 605 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 TTYH1Q9H313 450 aaPredicted RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 ISG20L2Q9H9L3 353 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
DDX56-203ENST00000421223 DHCR7Q9UBM7 475 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 MRPS33Q9Y291 106 aaKnown RBP10.13□□□□□ -0.79
DDX56-203ENST00000421223 A0A1B0GWA3 101 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 MAGEB4O15481 346 aaPredicted RBP10.12□□□□□ -0.79
DDX56-203ENST00000421223 SSX4O60224 188 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 ZGLP1P0C6A0 271 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 FOSL1P15407 271 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 HPGDP15428 266 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.12□□□□□ -0.79
DDX56-203ENST00000421223 TDGQ13569 410 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 PRR22Q8IZ63 422 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 OR4C3Q8NH37 302 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.12□□□□□ -0.79
DDX56-203ENST00000421223 DIRAS2Q96HU8 199 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 GAL3ST4Q96RP7 486 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 OR8D2Q9GZM6 311 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 NDUFB11Q9NX14 153 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 CRNNQ9UBG3 495 aaPredicted RBP10.12□□□□□ -0.79
DDX56-203ENST00000421223 PAIP2BQ9ULR5 123 aaKnown RBP10.12□□□□□ -0.79
DDX56-203ENST00000421223 RHPN2P1A8MT19 583 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 AQP9O43315 295 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 MBTPS2O43462 519 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 FOXS1O43638 330 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 BRINP1O60477 761 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 B3GALNT1O75752 331 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 HMGN1P05114 100 aa10.12□□□□□ -0.79
DDX56-203ENST00000421223 RPL4P36578 427 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms