RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OIT3Q8WWZ8 545 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 FAM46AQ96IP4 442 aaKnown RBP19.27■□□□□ 0.68
GPC1-202ENST00000420138 ADOQ96SZ5 270 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 PHOX2BQ99453 314 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 ULBP3Q9BZM4 244 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 HOXD1Q9GZZ0 328 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 DUSP21Q9H596 190 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 WDR54Q9H977 334 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 TIMMDC1Q9NPL8 285 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 CNIH4Q9P003 139 aa19.27■□□□□ 0.68
GPC1-202ENST00000420138 AKAP7Q9P0M2 348 aaPredicted RBP19.27■□□□□ 0.68
GPC1-202ENST00000420138 A0A0B4J2E0 115 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 TEX51A0A1B0GUA7 166 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 A0A1B0GX12 115 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 H3BMQ9 156 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 M0R129 80 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 KRT20P35900 424 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 TMBIM6P55061 237 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 RNF4P78317 190 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 TSPAN31Q12999 210 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 TRIP6Q15654 476 aaKnown RBP19.26■□□□□ 0.67
GPC1-202ENST00000420138 PIP4P1Q86T03 277 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 METTL21AQ8WXB1 218 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 COG8Q96MW5 612 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 RHNO1Q9BSD3 238 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 LOXL2Q9Y4K0 774 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 PCDHGB1Q9Y5G3 927 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 B3GALT1Q9Y5Z6 326 aa19.26■□□□□ 0.67
GPC1-202ENST00000420138 A0A1B0GWA3 101 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PMS2P1A4D2B8 440 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 CSTAP01040 98 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 CYC1P08574 325 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PCMT1P22061 227 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 IFNGR2P38484 337 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 SLC35A2P78381 396 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 CDCP2Q5VXM1 449 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 HLA-DQA1Q5Y7H0 255 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 C12orf73Q69YU5 71 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PAPD4Q6PIY7 484 aaKnown RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 CPEB2Q7Z5Q1 589 aaKnown RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 PIGXQ8TBF5 258 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 MUL1Q969V5 352 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 C8orf44Q96CB5 159 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 RTN4RQ9BZR6 473 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 STRADBQ9C0K7 418 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 CCDC90BQ9GZT6 254 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 DSN1Q9H410 356 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 TOR4AQ9NXH8 423 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PCDHGA1Q9Y5H4 931 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PCNX2A6NKB5 2137 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 H3BN98 237 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 OIP5O43482 229 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 MRPS14O60783 128 aaKnown RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 KLK3P07288 261 aaPredicted RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 PTNP21246 168 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 GSTM3P21266 225 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 TBXA2RP21731 343 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 FPR3P25089 353 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 ABCD3P28288 659 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 CSNK2BP67870 215 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 ZNF550Q7Z398 422 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 DEPDC4Q8N2C3 294 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 HSPBAP1Q96EW2 488 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 PLA2G12AQ9BZM1 189 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 NAA50Q9GZZ1 169 aaKnown RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 TMEM27Q9HBJ8 222 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 MRTO4Q9UKD2 239 aaKnown RBP19.25■□□□□ 0.67
GPC1-202ENST00000420138 SLC35A3Q9Y2D2 325 aa19.25■□□□□ 0.67
GPC1-202ENST00000420138 TRIM64BA6NI03 449 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 ICOSLGO75144 302 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 REM1O75628 298 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 KLF7O75840 302 aaPredicted RBP19.24■□□□□ 0.67
GPC1-202ENST00000420138 ATE1O95260 518 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 LCN1P31025 176 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 ISXQ2M1V0 245 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 SLC34A3Q8N130 599 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 MR1Q95460 341 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 OMA1Q96E52 524 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 ZNF426Q9BUY5 554 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 TRIM2Q9C040 744 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 CCNB1IP1Q9NPC3 277 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 ERVK-18Q9QC07 812 aa19.24■□□□□ 0.67
GPC1-202ENST00000420138 NXT1Q9UKK6 140 aaKnown RBP19.24■□□□□ 0.67
GPC1-202ENST00000420138 TMEM200CA6NKL6 621 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 CDC42EP2O14613 210 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 CHP2O43745 196 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 FAM20BO75063 409 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 UMODP07911 640 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 CDK5Q00535 292 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 TEKQ02763 1124 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 PLCXD2Q0VAA5 305 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 LINC00114Q6XXX2 140 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 HSDL2Q6YN16 418 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 C16orf47Q6ZP98 133 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 RASSF6Q6ZTQ3 369 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 RRM2BQ7LG56 351 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 RNF113BQ8IZP6 322 aaKnown RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 GATSQ8NAP1 163 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 GALNT6Q8NCL4 622 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms