RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.39
LINC01006-202ENST00000418309 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 GJE1A6NN92 205 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 KLF4O43474 513 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 NUDT17P0C025 328 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 PRPS1L1P21108 318 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 SHC1P29353 583 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 AGTR1P30556 359 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 SOAT1P35610 550 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 ATP12AP54707 1039 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 PGS1Q32NB8 556 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 TMEM176BQ3YBM2 270 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 CBLN3Q6UW01 205 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 MOAP1Q96BY2 351 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 COQ8BQ96D53 544 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 BDH2Q9BUT1 245 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 DUSP26Q9BV47 211 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 BHLHE41Q9C0J9 482 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 L2HGDHQ9H9P8 463 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 GPATCH2Q9NW75 528 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 LGALS13Q9UHV8 139 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 GPR52Q9Y2T5 361 aa12.62□□□□□ -0.39
LINC01006-202ENST00000418309 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
LINC01006-202ENST00000418309 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 H7C1Q1 480 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 SMAD7O15105 426 aaKnown RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 OIP5O43482 229 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 EFNA2O43921 213 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 BPGMP07738 259 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 CREB1P16220 341 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ELK4P28324 431 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ADH6P28332 368 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ARRB2P32121 409 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 CCR4P51679 360 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 NR1H2P55055 460 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 VSNL1P62760 191 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 MAD2L1Q13257 205 aaPredicted RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 RNPS1Q15287 305 aaKnown RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 TOMM34Q15785 309 aaPredicted RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 NDUFAF6Q330K2 333 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 BHLHB9Q6PI77 547 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ZNF704Q6ZNC4 412 aaPredicted RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 NUDCD3Q8IVD9 361 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 TUSC5Q8IXB3 177 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 PSMA8Q8TAA3 256 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 SFXN5Q8TD22 340 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 GPR119Q8TDV5 335 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 CPNE4Q96A23 557 aaPredicted RBP12.61□□□□□ -0.39
LINC01006-202ENST00000418309 PLPPR2Q96GM1 343 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 PPP1R36Q96LQ0 422 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 SRXN1Q9BYN0 137 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 ICAM5Q9UMF0 924 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 DTNAQ9Y4J8 743 aa12.61□□□□□ -0.39
LINC01006-202ENST00000418309 VPS13CQ709C8 3753 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 WDR91A4D1P6 747 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 CYP7B1O75881 506 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 PRKD3O94806 890 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 NTN1O95631 604 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 PLAUP00749 431 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 G6PDP11413 515 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 MATN1P21941 496 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 SLC7A1P30825 629 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 RPS26P62854 115 aaKnown RBP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 HBA1P69905 142 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 GPR68Q15743 365 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 NUFIP2Q7Z417 695 aaKnown RBP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 STEAP2Q8NFT2 490 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 TMEM171Q8WVE6 324 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 HDHD5Q9BXW7 423 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 NOP53Q9NZM5 478 aaKnown RBP12.6□□□□□ -0.39
LINC01006-202ENST00000418309 ACTL7BQ9Y614 415 aa12.6□□□□□ -0.39
LINC01006-202ENST00000418309 ROS1P08922 2347 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 ZNF264O43296 627 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 LY6G6DO95868 133 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 HEXAP06865 529 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 UBL4AP11441 157 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 PRKCAP17252 672 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
LINC01006-202ENST00000418309 IL32P24001 234 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 PTH2RP49190 550 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 CLDN8P56748 225 aa12.59□□□□□ -0.39
LINC01006-202ENST00000418309 EMX2Q04743 252 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms