RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 LINGO2Q7L985 606 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 EID2Q8N6I1 236 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OSTF1Q92882 214 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TCEAL3Q969E4 200 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PTDSS2Q9BVG9 487 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TEX12Q9BXU0 123 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ELP3Q9H9T3 547 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TRAV1-2A0A0B4J238 106 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 E9PI62 339 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SULT1C2O00338 296 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 FOXE1O00358 373 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CXCL11O14625 94 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ADAM12O43184 909 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 EIF4E2O60573 245 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 STX11O75558 287 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 EPPINO95925 133 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GP1BAP07359 652 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GNSP15586 552 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PREPP48147 710 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PTSQ03393 145 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 UBE2NLQ5JXB2 153 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM74A1Q5RGS3 127 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 IER5LQ5T953 404 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR7E24Q6IFN5 339 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM180BQ6P0A1 224 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF613Q6PF04 617 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SLCO4C1Q6ZQN7 724 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PGAP1Q75T13 922 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SERPINA12Q8IW75 414 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 MMP21Q8N119 569 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR52I2Q8NH67 350 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OR14A16Q8NHC5 309 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 HMGB4Q8WW32 186 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ARL5BQ96KC2 179 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 CMTM3Q96MX0 182 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 UROC1Q96N76 676 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GINS4Q9BRT9 223 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TINAGL1Q9GZM7 467 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PIGMQ9H3S5 423 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 HINT3Q9NQE9 182 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 H2AFY2Q9P0M6 372 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 KLF15Q9UIH9 416 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GLTPD2A6NH11 291 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 NDUFB6O95139 128 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 OAZ2O95190 189 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 S100A8P05109 93 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF35P13682 527 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 MGMTP16455 207 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 MLLT1Q03111 559 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC3A1Q07837 685 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PGGHGQ32M88 737 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ACSM3Q53FZ2 586 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 HENMT1Q5T8I9 393 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 SERPINA13PQ6UXR4 307 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ARMC10Q8N2F6 343 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 GANCQ8TET4 914 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 NEIL2Q969S2 332 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF707Q96C28 371 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM46AQ96IP4 442 aaKnown RBP7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 BRD9Q9H8M2 597 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 DMRT3Q9NQL9 472 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TDP1Q9NUW8 608 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 ANAPC1Q9H1A4 1944 aa7.47□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM82A0PJX8 343 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C17orf102A2RUQ5 167 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 F5H5P2 479 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 B4GALT2O60909 372 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 REM1O75628 298 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 TGFB1P01137 390 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 KLK1P06870 262 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 PAICSP22234 425 aaKnown RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 GPR143P51810 404 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 NR0B1P51843 470 aaKnown RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 OC90Q02509 493 aaPredicted RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 CNTN1Q12860 1018 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 SYPL1Q16563 259 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF805Q5CZA5 627 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 ZDHHC20Q5W0Z9 365 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C5orf46Q6UWT4 87 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 USP50Q70EL3 339 aaPredicted RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C16orf59Q7L2K0 433 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C6orf120Q7Z4R8 191 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 TMPRSS11BQ86T26 416 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 CPOQ8IVL8 374 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 CMTM4Q8IZR5 234 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM99Q8N816 258 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C17orf47Q8NEP4 570 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 OR56A3Q8NH54 315 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 C2CD4CQ8TF44 421 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 GCDHQ92947 438 aaPredicted RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 PGLYRP3Q96LB9 341 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 ENKD1Q9H0I2 346 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 MRPL17Q9NRX2 175 aaKnown RBP7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 KLHL9Q9P2J3 617 aa7.46□□□□□ -1.21
HMGXB4-202ENST00000418170 ANKRD20A5PA0PJZ0 165 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM218A2RU14 115 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 PRAMEF27A3QJZ7 478 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 OR6C68A6NDL8 312 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms