RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MARK4Q96L34 752 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ZNF681Q96N22 645 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PELOQ9BRX2 385 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 NUF2Q9BZD4 464 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PAIP1Q9H074 479 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 STMN4Q9H169 189 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 NXF5Q9H1B4 397 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 GLIPR2Q9H4G4 154 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 CLMPQ9H6B4 373 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 UNKLQ9H9P5 680 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 MYNNQ9NPC7 610 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 SLC35C2Q9NQQ7 365 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 AGPAT4Q9NRZ5 378 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 DEPPQ9NTK1 212 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GIMAP4Q9NUV9 329 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OLAHQ9NV23 265 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ARGLU1Q9NWB6 273 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 HPF1Q9NWY4 346 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 NKIRAS1Q9NYS0 192 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NDUFAF4Q9P032 175 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PSME2Q9UL46 239 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NPIPA1Q9UND3 350 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OSGIN2Q9Y236 505 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 YARS2Q9Y2Z4 477 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 RAP2CQ9Y3L5 183 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 HIVEP3Q5T1R4 2406 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ARHGAP21Q5T5U3 1957 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ZNF407Q9C0G0 2248 aa4.46□□□□□ -1.69
VPS41-205ENST00000414632 LRRK2Q5S007 2527 aa4.46□□□□□ -1.69
VPS41-205ENST00000414632 HECTD1Q9ULT8 2610 aa4.46□□□□□ -1.69
VPS41-205ENST00000414632 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ASH1LQ9NR48 2969 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 KIAA1549Q9HCM3 1950 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NBPF19A0A087WUL8 3843 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SYNDIG1LA6NDD5 238 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 C17orf51A8MQB3 221 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 MYO1GB0I1T2 1018 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 C9JVG2 144 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 TFECO14948 347 aaPredicted RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 TRIAP1O43715 76 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 PEX1O43933 1283 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 HS6ST1O60243 411 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 CDC40O60508 579 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-205ENST00000414632 PDE9AO76083 593 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ATP1B1P05026 303 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ELANEP08246 267 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 G6PDP11413 515 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ZNF24P17028 368 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 EPHA3P29320 983 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NTSP30990 170 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 GALNSP34059 522 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SERPINB5P36952 375 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 PIGAP37287 484 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 RFX3P48380 749 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 CDK9P50750 372 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 RPL14P50914 215 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 DIO3P55073 304 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 RPS7P62081 194 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 PLGLB1Q02325 96 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 FUT7Q11130 342 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ZNF155Q12901 538 aaPredicted RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 BIKQ13323 160 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 TOMM20Q15388 145 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ATP6AP1LQ52LC2 224 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 PIGGQ5H8A4 983 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 C6orf136Q5SQH8 315 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 IL23RQ5VWK5 629 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 RPUSD3Q6P087 351 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 OPN5Q6U736 354 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NPSR1Q6W5P4 371 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 RTL4Q6ZR62 310 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 FAM47EQ6ZV65 393 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 GALNT10Q86SR1 603 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 FAM9CQ8IZT9 166 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 HORMAD2Q8N7B1 307 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ZNF441Q8N8Z8 693 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 OR7G2Q8NG99 324 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 OR7A2PQ8NGA2 310 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 OR4N2Q8NGD1 307 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NUBPLQ8TB37 319 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SLC22A8Q8TCC7 542 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ST8SIA4Q92187 359 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NR4A3Q92570 626 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ADIPOR1Q96A54 375 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 PPCDCQ96CD2 204 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SPACA9Q96E40 222 aaPredicted RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 FCRL1Q96LA6 429 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ATP6V1G3Q96LB4 118 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 PPP3R2Q96LZ3 170 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 JSRP1Q96MG2 331 aaPredicted RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 AMDHD1Q96NU7 426 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 DCLRE1CQ96SD1 692 aaKnown RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 CCT7Q99832 543 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SLX1AQ9BQ83 275 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms