RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 OR1E3Q8WZA6 343 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 VSTM2LQ96N03 204 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 RNF126Q9BV68 326 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 ACTR8Q9H981 624 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 CYTL1Q9NRR1 136 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 RDH8Q9NYR8 311 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 SPASTQ9UBP0 616 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 BTNL2Q9UIR0 455 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 ZNF225Q9UK10 706 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 FOXJ3Q9UPW0 622 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 TTC21BQ7Z4L5 1316 aa2.51□□□□□ -2.01
PMS1-203ENST00000409593 IGKV6-21A0A0C4DH24 114 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 PSMB11A5LHX3 300 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 A6NDX4 124 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 A8MUA0 341 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 PDHBP11177 359 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 MAGEA5P43359 124 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 LINC00315P59091 139 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 ARFRP1Q13795 201 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 WDR74Q6RFH5 385 aaPredicted RBP2.5□□□□□ -2.01
PMS1-203ENST00000409593 Q8N9W7 124 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 DNAJA4Q8WW22 397 aaPredicted RBP2.5□□□□□ -2.01
PMS1-203ENST00000409593 POLR2J2Q9GZM3 115 aaKnown RBP2.5□□□□□ -2.01
PMS1-203ENST00000409593 MAGT1Q9H0U3 335 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 POLR2J3Q9H1A7 115 aaKnown RBP2.5□□□□□ -2.01
PMS1-203ENST00000409593 MRPL39Q9NYK5 338 aaKnown RBP2.5□□□□□ -2.01
PMS1-203ENST00000409593 LTBP1Q14766 1721 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 FAM230AA0A1W2PPH8 454 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 H3BMQ9 156 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 DUX1O43812 170 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 TOM1L1O75674 476 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 DLSTP36957 453 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 GPNMBQ14956 572 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 NDUFA9Q16795 377 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 LIPNQ5VXI9 398 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 UNQ9370/PRO34162Q6UXP9 181 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 VRK2Q86Y07 508 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 LINC01561Q8N1V8 128 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 FAM71E2Q8N5Q1 922 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 FAM71CQ8NEG0 241 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 MARCH1Q8TCQ1 289 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 BLOC1S5Q8TDH9 187 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 FAM151AQ8WW52 585 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 SLC5A11Q8WWX8 675 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 HPDLQ96IR7 371 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 SRXN1Q9BYN0 137 aa2.5□□□□□ -2.01
PMS1-203ENST00000409593 THSD7BQ9C0I4 1608 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 SPAG9O60271 1321 aaKnown RBP2.49□□□□□ -2.01
PMS1-203ENST00000409593 UBE4BO95155 1302 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.49□□□□□ -2.01
PMS1-203ENST00000409593 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.49□□□□□ -2.01
PMS1-203ENST00000409593 TRIM64A6NGJ6 449 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 TRIM64BA6NI03 449 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 ANKRD30BLA7E2S9 258 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 TGFAP01135 160 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 ETS1P14921 441 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 BDKRB1P46663 353 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 CSNK1G2P78368 415 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 GAMTQ14353 236 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 ADPRMQ3LIE5 342 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 ZNF691Q5VV52 312 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 ELMOD2Q8IZ81 293 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 MTURNQ8N3F0 131 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 CHRDL1Q9BU40 450 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 RAB17Q9H0T7 212 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 MOSPD1Q9UJG1 213 aa2.49□□□□□ -2.01
PMS1-203ENST00000409593 FAM166BA8MTA8 275 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 ANKRD63C9JTQ0 380 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 SNAI2O43623 268 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 MMP1P03956 469 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 RPS2P15880 293 aaKnown RBP2.48□□□□□ -2.01
PMS1-203ENST00000409593 ATXN7L3Q14CW9 347 aaPredicted RBP2.48□□□□□ -2.01
PMS1-203ENST00000409593 MAPK6Q16659 721 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 ACSM5Q6NUN0 579 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 ANKRD37Q7Z713 158 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 SYVN1Q86TM6 617 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 BCORP1Q8N888 145 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 CELF6Q96J87 481 aaKnown RBP2.48□□□□□ -2.01
PMS1-203ENST00000409593 SLC30A2Q9BRI3 323 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 GSDMCQ9BYG8 508 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 ANAPC7Q9UJX3 599 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 PRPF19Q9UMS4 504 aaKnown RBP2.48□□□□□ -2.01
PMS1-203ENST00000409593 RNF6Q9Y252 685 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 SLCO1B1Q9Y6L6 691 aa2.48□□□□□ -2.01
PMS1-203ENST00000409593 GJE1A6NN92 205 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 SULT2B1O00204 365 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 STX7O15400 261 aaKnown RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 SNAPINO95295 136 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 CLUP10909 449 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 PAICSP22234 425 aaKnown RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 CALB2P22676 271 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 PRDX3P30048 256 aaKnown RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 NMT1P30419 496 aaKnown RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 ATXN3P54252 364 aaPredicted RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 NAPAP54920 295 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 MAP2K1Q02750 393 aaPredicted RBP2.47□□□□□ -2.01
PMS1-203ENST00000409593 LAGE3Q14657 143 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
PMS1-203ENST00000409593 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms