RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SLC46A1Q96NT5 459 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 OCEL1Q9H607 264 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 MED17Q9NVC6 651 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 LSM2Q9Y333 95 aaKnown RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 CCRL2O00421 344 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 POLR1CO15160 346 aaPredicted RBP19.08■□□□□ 0.64
USP39-203ENST00000409470 LAMTOR5O43504 91 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 GRK5P34947 590 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 MTNR1AP48039 350 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 ZXDAP98168 799 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 C1DQ13901 141 aaKnown RBP19.08■□□□□ 0.64
USP39-203ENST00000409470 HLA-BQ31612 363 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 NDUFAF6Q330K2 333 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 TMPRSS11FQ6ZWK6 438 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 KANSL1Q7Z3B3 1105 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 NANOGP1Q8N7R0 232 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 LSMEM1Q8N8F7 131 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 PROKR2Q8NFJ6 384 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 OR4C6Q8NH72 309 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 SLC2A12Q8TD20 617 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 RFKQ969G6 155 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 BORCS5Q969J3 196 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 RNF31Q96EP0 1072 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 LMF1Q96S06 567 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 CHCHD6Q9BRQ6 235 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 SLC7A5P2Q9GIP4 190 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 UBQLN3Q9H347 655 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 CFL2Q9Y281 166 aa19.08■□□□□ 0.64
USP39-203ENST00000409470 APOL3O95236 402 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PNLIPP16233 465 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 MYL12AP19105 171 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 CDH11P55287 796 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 RAB40BQ12829 278 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 ELAVL1Q15717 326 aaKnown RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 NSDHLQ15738 373 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 SAP25Q8TEE9 199 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 OPALINQ96PE5 141 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 MEPEQ9NQ76 525 aaPredicted RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 PRMT8Q9NR22 394 aaPredicted RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 CHCHD3Q9NX63 227 aaKnown RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 SEC16AO15027 2179 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PI4KAP42356 2102 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 AGRPO00253 132 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 ARHGAP33O14559 1287 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 SIGLEC6O43699 453 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 RCBTB2O95199 551 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 ZGLP1P0C6A0 271 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 HPGDP15428 266 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 UGT2B10P36537 528 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PPICP45877 212 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 CTBP2P56545 445 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 CSTF1Q05048 431 aaKnown RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 TMEM44Q2T9K0 475 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PLK5Q496M5 336 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PERM1Q5SV97 790 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 PAQR6Q6TCH4 344 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 USP43Q70EL4 1123 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 TMPRSS9Q7Z410 1059 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 ZSCAN1Q8NBB4 408 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 OR13C2Q8NGS9 318 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 EDAQ92838 391 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 RACGAP1Q9H0H5 632 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 MRPS18AQ9NVS2 196 aaKnown RBP19.07■□□□□ 0.64
USP39-203ENST00000409470 PCDHGA3Q9Y5H0 932 aa19.07■□□□□ 0.64
USP39-203ENST00000409470 TCRBV16S1A1N1A0A5B0 115 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 TOX3O15405 576 aaPredicted RBP19.06■□□□□ 0.64
USP39-203ENST00000409470 SLC2A10O95528 541 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 CFIP05156 583 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 SCG5P05408 212 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 TDGF1P13385 188 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 OPRL1P41146 370 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 RBM34P42696 430 aaKnown RBP19.06■□□□□ 0.64
USP39-203ENST00000409470 TUBA1BP68363 451 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 DOC2BQ14184 412 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 TIMM50Q3ZCQ8 353 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 RPL13AP3Q6NVV1 102 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 ULK3Q6PHR2 472 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 ZNF574Q6ZN55 896 aaPredicted RBP19.06■□□□□ 0.64
USP39-203ENST00000409470 TUBA1AQ71U36 451 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 C7orf57Q8NEG2 295 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 OTULINQ96BN8 352 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 NXF5Q9H1B4 397 aaKnown RBP19.06■□□□□ 0.64
USP39-203ENST00000409470 SYNDIG1Q9H7V2 258 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 H2AFY2Q9P0M6 372 aaPredicted RBP19.06■□□□□ 0.64
USP39-203ENST00000409470 OSGIN1Q9UJX0 560 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 MKL2Q9ULH7 1088 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 CARD8Q9Y2G2 431 aa19.06■□□□□ 0.64
USP39-203ENST00000409470 EFCAB7A8K855 629 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 RFPL3O75679 317 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 DDAH2O95865 285 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 ETV5P41161 510 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 ETV1P50549 477 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 C3orf38Q5JPI3 329 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 AADACL4Q5VUY2 407 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 KIRREL2Q6UWL6 708 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 SLC15A4Q8N697 577 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 ZNF527Q8NB42 609 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 ZNF721Q8TF20 911 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 GAL3ST4Q96RP7 486 aa19.05■□□□□ 0.64
USP39-203ENST00000409470 HOXD1Q9GZZ0 328 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms