RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 OR1C1Q15619 314 aa6.85□□□□□ -1.31
SCN9A-202ENST00000409435 NPTX1Q15818 432 aa6.85□□□□□ -1.31
SCN9A-202ENST00000409435 TECPR1Q7Z6L1 1165 aa6.85□□□□□ -1.31
SCN9A-202ENST00000409435 OR10R2Q8NGX6 335 aa6.85□□□□□ -1.31
SCN9A-202ENST00000409435 PIWIL1Q96J94 861 aaKnown RBP6.85□□□□□ -1.31
SCN9A-202ENST00000409435 COQ10AQ96MF6 247 aa6.85□□□□□ -1.31
SCN9A-202ENST00000409435 RPS10-NUDT3A0A1W2PQS6 291 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 H7C417 338 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CDX4O14627 284 aaPredicted RBP6.84□□□□□ -1.31
SCN9A-202ENST00000409435 EI24O14681 340 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 IMPA2O14732 288 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 SURF4O15260 269 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CIDEAO60543 219 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 RAB3DO95716 219 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ADAP00813 363 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 DRD2P14416 443 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 RPS10P46783 165 aaKnown RBP6.84□□□□□ -1.31
SCN9A-202ENST00000409435 BIDP55957 195 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 NRG1Q02297 640 aaPredicted RBP6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PTP4A2Q12974 167 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 SEC23BQ15437 767 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 DPY19L1Q2PZI1 675 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 KIAA1614Q5VZ46 1190 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CMC1Q7Z7K0 106 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 NAXEQ8NCW5 288 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 NINJ1Q92982 152 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 LRRC58Q96CX6 371 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 F2RL3Q96RI0 385 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 POTEKPQ9BYX7 375 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 FN3KRPQ9HA64 309 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CPNE5Q9HCH3 593 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ENY2Q9NPA8 101 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GRHPRQ9UBQ7 328 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 DNAJB11Q9UBS4 358 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ATG4BQ9Y4P1 393 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 LRRC42Q9Y546 428 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 LILRA5A6NI73 299 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GP1BAP07359 652 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PSPHP78330 225 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 MAD2L1BPQ15013 274 aaPredicted RBP6.84□□□□□ -1.31
SCN9A-202ENST00000409435 VAMP3Q15836 100 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 MARCH9Q86YJ5 346 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 NUP43Q8NFH3 380 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 OR5T1Q8NG75 326 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CT55Q8WUE5 264 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 RAB39BQ96DA2 213 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 OR51E2Q9H255 320 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 LRRC19Q9H756 370 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 IL21Q9HBE4 155 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GPATCH2Q9NW75 528 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GLTPQ9NZD2 209 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 SLC7A8Q9UHI5 535 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 FBXL3Q9UKT7 428 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PCDHB14Q9Y5E9 798 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 A0A1W2PP18 115 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 FUOMA2VDF0 154 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 E7ESA3 106 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PTTG1O95997 202 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 IL1R2P27930 398 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ZNF169Q14929 603 aaPredicted RBP6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GPR157Q5UAW9 335 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 REP15Q6BDI9 236 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ZNF439Q8NDP4 499 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PSD4Q8NDX1 1056 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 OR5L1Q8NGL2 311 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 OR5K1Q8NHB7 308 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 COQ8BQ96D53 544 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 CD244Q9BZW8 370 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 TMEM100Q9NV29 134 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 TEX13CA0A0J9YWL9 993 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 LRRC30A6NM36 301 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 MAGEB17A8MXT2 336 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 KRBOX1C9JBD0 128 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ZNF878C9JN71 531 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 K7EQS6 105 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 EMC8O43402 210 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ARL6IP5O75915 188 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 INMTO95050 263 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 C2P06681 752 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ACTA2P62736 377 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ACTG2P63267 376 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ACTC1P68032 377 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ACTA1P68133 377 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ARHGAP11BQ3KRB8 267 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 SLC36A3Q495N2 470 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PYCR3Q53H96 274 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 KCNIP4Q6PIL6 250 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 BAIAP2L2Q6UXY1 529 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 BMP8AQ7Z5Y6 402 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 BEST3Q8N1M1 668 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 GPR26Q8NDV2 337 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ADIPOR1Q96A54 375 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
SCN9A-202ENST00000409435 ELOVL7A1L3X0 281 aa6.83□□□□□ -1.32
SCN9A-202ENST00000409435 BLOC1S5-TXNDC5H3BN57 136 aa6.83□□□□□ -1.32
SCN9A-202ENST00000409435 TGOLN2O43493 480 aa6.83□□□□□ -1.32
SCN9A-202ENST00000409435 ICMTO60725 284 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms