RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PLA2G3Q9NZ20 509 aa19.37■□□□□ 0.69
CPNE1-204ENST00000397443 PDP1Q9P0J1 537 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 TESQ9UGI8 421 aaKnown RBP19.37■□□□□ 0.69
CPNE1-204ENST00000397443 EI24O14681 340 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 INPP5JQ15735 1006 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-204ENST00000397443 ZSWIM7Q19AV6 140 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 FAM71CQ8NEG0 241 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 OIT3Q8WWZ8 545 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 SLC41A3Q96GZ6 507 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 DPH1Q9BZG8 443 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 ACAD8Q9UKU7 415 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 SLC7A7Q9UM01 511 aa19.36■□□□□ 0.69
CPNE1-204ENST00000397443 THY1P04216 161 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 FPR1P21462 350 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 EIF2S3P41091 472 aaKnown RBP19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ARHGDIAP52565 204 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 EPS8Q12929 822 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 PACS2Q86VP3 889 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ALPK1Q96QP1 1244 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 EPYCQ99645 322 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF559Q9BR84 538 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 C9orf16Q9BUW7 83 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 OSBPL11Q9BXB4 747 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 LAT2Q9GZY6 243 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 SMURF2Q9HAU4 748 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 TMEM27Q9HBJ8 222 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ADAM10O14672 748 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 IFNA8P32881 189 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 PTGDSP41222 190 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 IDH2P48735 452 aaKnown RBP19.35■□□□□ 0.69
CPNE1-204ENST00000397443 CYB561P49447 251 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 COPZ1P61923 177 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 SPINK14Q6IE38 97 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 SHQ1Q6PI26 577 aaKnown RBP19.35■□□□□ 0.69
CPNE1-204ENST00000397443 IZUMO2Q6UXV1 221 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 GDF7Q7Z4P5 450 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 SPACA3Q8IXA5 215 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF563Q8TA94 476 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 MAGEE2Q8TD90 523 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-204ENST00000397443 MAN2C1Q9NTJ4 1040 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 MED11Q9P086 117 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 ABI3Q9P2A4 366 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 HRH3Q9Y5N1 445 aa19.35■□□□□ 0.69
CPNE1-204ENST00000397443 CDC40O60508 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
CPNE1-204ENST00000397443 ELAVL4P26378 380 aaKnown RBP19.34■□□□□ 0.69
CPNE1-204ENST00000397443 HLCSP50747 726 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 COL28A1Q2UY09 1125 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 AGAP7PQ5VUJ5 663 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 SLC22A10Q63ZE4 541 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 NKAIN4Q8IVV8 208 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF440Q8IYI8 595 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 OFCC1Q8IZS5 231 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 SVOPLQ8N434 492 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 PIK3C3Q8NEB9 887 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 OR9Q2Q8NGE9 314 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 OR4C15Q8NGM1 316 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 SLC7A13Q8TCU3 470 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 AGAP4Q96P64 663 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 VCX3BQ9H321 246 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 PPP4R1LQ9P1A2 415 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 RPS6KB2Q9UBS0 482 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 WIF1Q9Y5W5 379 aa19.34■□□□□ 0.69
CPNE1-204ENST00000397443 A0A1B0GWA3 101 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 TRAPPC13A5PLN9 417 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 GNB5O14775 395 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 WDPCPO95876 746 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 GCKP35557 465 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 CD96P40200 585 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 GAS1P54826 345 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 AQP4P55087 323 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 LSM11P83369 360 aaKnown RBP eCLIP19.33■□□□□ 0.69
CPNE1-204ENST00000397443 ST3GAL3Q11203 375 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 SEC23BQ15437 767 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 TOMM34Q15785 309 aaPredicted RBP19.33■□□□□ 0.69
CPNE1-204ENST00000397443 DCST1Q5T197 706 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 CCDC81Q6ZN84 652 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 RTL4Q6ZR62 310 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 HIPK1Q86Z02 1210 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 B4GALNT2Q8NHY0 566 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 PAQR8Q8TEZ7 354 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 ZNF524Q96C55 264 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 EXOSC3Q9NQT5 275 aaKnown RBP19.33■□□□□ 0.69
CPNE1-204ENST00000397443 LRFN1Q9P244 771 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 TMCC3Q9ULS5 477 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 ICAM5Q9UMF0 924 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 CHD8Q9HCK8 2581 aa19.33■□□□□ 0.69
CPNE1-204ENST00000397443 B4DXG7 233 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 EIF4E2O60573 245 aaKnown RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 DPM1O60762 260 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 OR5F1O95221 314 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF26P17031 533 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 CASRP41180 1078 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 RPP38P78345 283 aaKnown RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 IL1RL1Q01638 556 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 C17orf67Q0P5P2 114 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 PODNL1Q6PEZ8 512 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 DND1Q8IYX4 353 aaKnown RBP19.33■□□□□ 0.68
CPNE1-204ENST00000397443 CATSPER1Q8NEC5 780 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 GIPC3Q8TF64 312 aa19.33■□□□□ 0.68
CPNE1-204ENST00000397443 JSRP1Q96MG2 331 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms