RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MAGEA8P43361 318 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 DNASE1L1P49184 302 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 GSK3BP49841 420 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 RNF4P78317 190 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 POU6F2P78424 691 aaPredicted RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 HPCAP84074 193 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 SF3B4Q15427 424 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■□□□ 13.7
SEC13-205ENST00000397101 ERICH5Q6P6B1 374 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 PRSS57Q6UWY2 283 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 ASRGL1Q7L266 308 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 SERPINA11Q86U17 422 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 DND1Q8IYX4 353 aaKnown RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 SLC16A11Q8NCK7 471 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 FAM156AQ8NDB6 213 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 NEIL3Q8TAT5 605 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 CDS1Q92903 461 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 SLC35A4Q96G79 324 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 REPIN1Q9BWE0 567 aaKnown RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 MMADHCQ9H3L0 296 aaPredicted RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 PIGUQ9H490 435 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 EXO5Q9H790 373 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 LIN28AQ9H9Z2 209 aaKnown RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 ZFP64Q9NPA5 681 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 ABCD2Q9UBJ2 740 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 P2RX2Q9UBL9 471 aa12.42□□□□□ -0.42
SEC13-205ENST00000397101 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
SEC13-205ENST00000397101 MPDZO75970 2070 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 PRORSD1PA6NEY8 169 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 HMGN4O00479 90 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 ZNF354AO60765 605 aaPredicted RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 IL18BPO95998 194 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 IL2RAP01589 272 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 CLPSP04118 112 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 HRGP04196 525 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 BCHEP06276 602 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 NUDT7P0C024 238 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 MSX2P35548 267 aaPredicted RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 NRG3P56975 720 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 CEACAM7Q14002 265 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 SCARB2Q14108 478 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 GNA13Q14344 377 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 DUSP5Q16690 384 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 MICU2Q8IYU8 434 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 NFKBIDQ8NI38 313 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 NUBPLQ8TB37 319 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 PAQR8Q8TEZ7 354 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 MAL2Q969L2 176 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 REXO5Q96IC2 774 aaKnown RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 LCORQ96JN0 433 aaPredicted RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 STACQ99469 402 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 LMF2Q9BU23 707 aaKnown RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 WWTR1Q9GZV5 400 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 SERHL2Q9H4I8 314 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 GMPR2Q9P2T1 348 aaKnown RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 EGFL7Q9UHF1 273 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 MRTO4Q9UKD2 239 aaKnown RBP12.41□□□□□ -0.42
SEC13-205ENST00000397101 USP22Q9UPT9 525 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 ANGPT4Q9Y264 503 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 DTX4Q9Y2E6 619 aa12.41□□□□□ -0.42
SEC13-205ENST00000397101 GXYLT2A0PJZ3 443 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 CFAP73A6NFT4 308 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 PSMG1O95456 288 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
SEC13-205ENST00000397101 ATP6V1C1P21283 382 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 PPICP45877 212 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 ZNF136P52737 540 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 MVDP53602 400 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 CORO7P57737 925 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 KCNJ2P63252 427 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 CDK6Q00534 326 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 RBBP4Q09028 425 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 EBPQ15125 230 aaKnown RBP12.4□□□□□ -0.42
SEC13-205ENST00000397101 SYPL1Q16563 259 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 VMACQ2NL98 169 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 ZNF791Q3KP31 576 aaPredicted RBP12.4□□□□□ -0.42
SEC13-205ENST00000397101 SPATS1Q496A3 300 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 PIGGQ5H8A4 983 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 SLC22A10Q63ZE4 541 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 FIGNL1Q6PIW4 674 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 PM20D2Q8IYS1 436 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 TAGAPQ8N103 731 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 C10orf111Q8N326 155 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 FIG4Q92562 907 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 FAM162AQ96A26 154 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 NTNG2Q96CW9 530 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 HSPBAP1Q96EW2 488 aa12.4□□□□□ -0.42
SEC13-205ENST00000397101 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms