RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 GIN1Q9NXP7 522 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 PRSS50Q9UI38 385 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 EMCNQ9ULC0 261 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 PTGDR2Q9Y5Y4 395 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 IGHV4-30-2A0A087WSY4 118 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 SHISA9B4DS77 424 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 G3V2L1 256 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 H3BQF6 201 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 PHF1O43189 567 aaPredicted RBP18.71■□□□□ 0.59
TRAF4-203ENST00000394925 CDH11P55287 796 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 PPA1Q15181 289 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 CFAP157Q5JU67 520 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 ZCCHC12Q6PEW1 402 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 CBLN3Q6UW01 205 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 LRIG3Q6UXM1 1119 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 ZYG11AQ6WRX3 759 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 Q6ZT83 130 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 FRMD7Q6ZUT3 714 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 SLC43A2Q8N370 569 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 NOA1Q8NC60 698 aaKnown RBP18.71■□□□□ 0.59
TRAF4-203ENST00000394925 CLHC1Q8NHS4 586 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 ACMSDQ8TDX5 336 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 ZFP90Q8TF47 636 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 ZNF764Q96H86 408 aaPredicted RBP18.71■□□□□ 0.59
TRAF4-203ENST00000394925 METTL2AQ96IZ6 378 aaKnown RBP18.71■□□□□ 0.59
TRAF4-203ENST00000394925 BTBD2Q9BX70 525 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 C1orf109Q9NX04 203 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 B3GALT5Q9Y2C3 310 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 CARD8Q9Y2G2 431 aa18.71■□□□□ 0.59
TRAF4-203ENST00000394925 NPIPA5A0A0B4J1W7 369 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 C9JVG2 144 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 NPIPA7E9PJI5 369 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 NPIPB8E9PQR5 432 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 TBX19O60806 448 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 HSPA4LO95757 839 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 ABHD2P08910 425 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 NPIPA8P0DM63 369 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 UROSP10746 265 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 SDC1P18827 310 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 PRPH2P23942 346 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 FRKP42685 505 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 TOMM34Q15785 309 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 CLEC6AQ6EIG7 209 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 MTERF4Q7Z6M4 381 aaKnown RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 OR2W6PQ8NHA6 318 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 CDS1Q92903 461 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF775Q96BV0 537 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 MUCL1Q96DR8 90 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 CCT7Q99832 543 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 GRIP2Q9C0E4 1043 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 CXorf36Q9H7Y0 433 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 L2HGDHQ9H9P8 463 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 ACSS1Q9NUB1 689 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 DCDC2Q9UHG0 476 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 BAIAP2L1Q9UHR4 511 aa18.7■□□□□ 0.58
TRAF4-203ENST00000394925 GPC6Q9Y625 555 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-203ENST00000394925 A0A1W2PNR3 127 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 FAM234BA2RU67 622 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 SLC28A1O00337 649 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ABCD4O14678 606 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 RGS14O43566 566 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 URI1O94763 535 aaPredicted RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 FAM157CP0CG43 387 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ATP6V1C1P21283 382 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 SLC7A1P30825 629 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 OR3A2P47893 321 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 P2RX1P51575 399 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 NUDT6P53370 316 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 NAA20P61599 178 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 NRF1Q16656 503 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 NDUFAF6Q330K2 333 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 EXOSC6Q5RKV6 272 aaKnown RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 C6orf52Q5T4I8 152 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 FAM120BQ96EK7 910 aaKnown RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 PSD2Q9BQI7 771 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ZCCHC3Q9NUD5 404 aaKnown RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 KLHL9Q9P2J3 617 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 TBK1Q9UHD2 729 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ING1Q9UK53 422 aaPredicted RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 ICAM5Q9UMF0 924 aa18.69■□□□□ 0.58
TRAF4-203ENST00000394925 YLPM1P49750 1951 aaKnown RBP18.69■□□□□ 0.58
TRAF4-203ENST00000394925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.68■□□□□ 0.581e-12■■■■□ 19.6
TRAF4-203ENST00000394925 KIF2AO00139 706 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 GTPBP1O00178 669 aaKnown RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 HMGN2P05204 90 aaKnown RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 PRKCAP17252 672 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 EDNRAP25101 427 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 RAC3P60763 192 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 PDE7AQ13946 482 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 LASP1Q14847 261 aaKnown RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 KLHL26Q53HC5 615 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 AGAP6Q5VW22 663 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF527Q8NB42 609 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 OR2T11Q8NH01 316 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 GPR119Q8TDV5 335 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 FCRL1Q96LA6 429 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 ADAD1Q96M93 576 aaKnown RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 PIGUQ9H490 435 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms