RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 A0A0B4J203 849 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR2W5A6NFC9 320 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 GTPBP1O00178 669 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 IGHA1P01876 353 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 IFI30P13284 250 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 HTR1FP30939 366 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 IFNGR2P38484 337 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 STAT5AP42229 794 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 MAP2K3P46734 347 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ANXA11P50995 505 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SRP54P61011 504 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 TNFRSF17Q02223 184 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 LCN1P1Q5VSP4 162 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ARL9Q6T311 187 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 Q6ZSR6 202 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ASB18Q6ZVZ8 466 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR10H4Q8NGA5 316 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 RBCK1Q9BYM8 510 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 C8orf33Q9H7E9 229 aaPredicted RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 PTGFRNQ9P2B2 879 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 EXOGQ9Y2C4 368 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 IMPA2O14732 288 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 FGF17O60258 216 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SEMA4FO95754 770 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 CCINQ13939 588 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 DSG2Q14126 1118 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 CDK10Q15131 360 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 TRIQKQ629K1 86 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SSX6Q7RTT6 188 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR51L1Q8NGJ5 315 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 DNAJA4Q8WW22 397 aaPredicted RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ASB12Q8WXK4 309 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 SIDT1Q9NXL6 827 aaKnown RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR6C2Q9NZP2 312 aa12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF223Q9UK11 482 aaPredicted RBP12.5□□□□□ -0.41
GTF2F1-201ENST00000394456 OR6C70A6NIJ9 312 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 J3QRE1 110 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 AKR7A2O43488 359 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 RNF13O43567 381 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PRKNO60260 465 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PLOD3O60568 738 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 LYPD3O95274 346 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM157BP0CG42 384 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ACVR1BP36896 505 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC3A1Q07837 685 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 QPRTQ15274 297 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 OR1Q1Q15612 314 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 FCRL6Q6DN72 434 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF614Q8N883 585 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 YIPF7Q8N8F6 280 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 OR4K14Q8NGD5 310 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM3CQ92520 227 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PEX11GQ96HA9 241 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PTCHD1Q96NR3 888 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 OR2A5Q96R48 311 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 GAS2L1Q99501 681 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ALG8Q9BVK2 526 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 WSB2Q9NYS7 404 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 UNC119BA6NIH7 251 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 SEC14L5O43304 696 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 APBB3O95704 486 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 EIF4EP06730 217 aaKnown RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 CELA2BP08218 269 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 RPS7P62081 194 aaKnown RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PPP3R1P63098 170 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 EFR3AQ14156 821 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 GPR18Q14330 331 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 MTFR2Q6P444 385 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 PEX5LQ8IYB4 626 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 OR2L13Q8N349 312 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 MTHFD2LQ9H903 347 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 C2orf42Q9NWW7 574 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 H2AFY2Q9P0M6 372 aaPredicted RBP12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
GTF2F1-201ENST00000394456 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 LRRN3E7EW58 273 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 BHLHE40O14503 412 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 AKAP8O43823 692 aaKnown RBP12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 OR5F1O95221 314 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms