RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 XPAP23025 273 aaPredicted RBP17.58■□□□□ 0.41
HOXC6-202ENST00000394331 MST1P26927 711 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 CAPZA2P47755 286 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 PNLIPRP1P54315 467 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 PSMA6P60900 246 aaKnown RBP17.58■□□□□ 0.41
HOXC6-202ENST00000394331 ZNF626Q68DY1 528 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 OR5M10Q6IEU7 315 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 REEP3Q6NUK4 255 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 SLC9B2Q86UD5 537 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 ARMC10Q8N2F6 343 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 AKAP7Q9P0M2 348 aaPredicted RBP17.58■□□□□ 0.41
HOXC6-202ENST00000394331 PTGFRNQ9P2B2 879 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 TBX21Q9UL17 535 aa17.58■□□□□ 0.41
HOXC6-202ENST00000394331 A0A0G2JK05 382 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 MGAT4DA6NG13 374 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM202A6NGA9 273 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SEMA7AO75326 666 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 NME6O75414 186 aaPredicted RBP17.58■□□□□ 0.4
HOXC6-202ENST00000394331 ADH1AP07327 375 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 TIMP2P16035 220 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 TYRP1P17643 537 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 GSTM3P21266 225 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 S100PP25815 95 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 PSMD4P55036 377 aaKnown RBP17.58■□□□□ 0.4
HOXC6-202ENST00000394331 STX4Q12846 297 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 KRT33BQ14525 404 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 ARSIQ5FYB1 569 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 ANKRD19PQ9H560 264 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 GPN1Q9HCN4 374 aaPredicted RBP17.58■□□□□ 0.4
HOXC6-202ENST00000394331 TAS2R5Q9NYW4 299 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 A0A1W2PRQ8 180 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SIX6O95475 246 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SERPINA3P01011 423 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SAGP10523 405 aaPredicted RBP17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SPI1P17947 270 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 DRD5P21918 477 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 CCR9P51686 369 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 E2F1Q01094 437 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 TRAM1Q15629 374 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 LHFPL3Q86UP9 236 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 HORMAD2Q8N7B1 307 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 RASGEF1AQ8N9B8 481 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 ASB13Q8WXK3 278 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 GLYATL1Q969I3 302 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 ENTPD4Q9Y227 616 aa17.58■□□□□ 0.4
HOXC6-202ENST00000394331 SLC5A10A0PJK1 596 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 CREBL2O60519 120 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 CDC123O75794 336 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 S100A9P06702 114 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 DDX6P26196 483 aaKnown RBP eCLIP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 PRLHRP49683 370 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 MAT1AQ00266 395 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM255AQ5JRV8 349 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF322Q6U7Q0 402 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SLC7A13Q8TCU3 470 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF296Q8WUU4 475 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SPHK2Q9NRA0 654 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 RASL12Q9NYN1 266 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 NPFFR2Q9Y5X5 522 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SLC9B1P1A6NJY1 282 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF197O14709 1029 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 CCL16O15467 120 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 CXCL14O95715 111 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SLC16A8O95907 504 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 UBBP0CG47 229 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 UBCP0CG48 685 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 IMPA1P29218 277 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 VEGFCP49767 419 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 CTSCP53634 463 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 RPS27AP62979 156 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 UBA52P62987 128 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SERTAD2Q14140 314 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 Q3ZCU0 254 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 ELP2Q6IA86 826 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 MOB3CQ70IA8 216 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 JAZF1Q86VZ6 243 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SKA3Q8IX90 412 aa17.57■□□□□ 0.4
HOXC6-202ENST00000394331 SPRYD4Q8WW59 207 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 MRPL48Q96GC5 212 aaKnown RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 TP53BP1Q12888 1972 aaPredicted RBP17.57■□□□□ 0.4
HOXC6-202ENST00000394331 ARPC5O15511 151 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 ETHE1O95571 254 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 EGFP01133 1207 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 RPA2P15927 270 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 MPGP29372 298 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 CCR2P41597 374 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 PREPP48147 710 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 LGALS3BPQ08380 585 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 C1orf94Q6P1W5 598 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 MED27Q6P2C8 311 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 DPPA4Q7L190 304 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 KRT78Q8N1N4 520 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 MEIOBQ8N635 442 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 BEX1Q9HBH7 125 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 DCAF16Q9NXF7 216 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 GNG14A0A1W2PPG7 69 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 PMS2P1A4D2B8 440 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 TIA1P31483 386 aaKnown RBP eCLIP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms