RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SZRD1Q7Z422 152 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 COX18Q8N8Q8 333 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 OR10H5Q8NGA6 315 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 FBXO27Q8NI29 283 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF524Q96C55 264 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 C16orf58Q96GQ5 468 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 FCRL1Q96LA6 429 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 TSPYL1Q9H0U9 437 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 TMEM160Q9NX00 188 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
CHMP3-202ENST00000393773 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 EMCNQ9ULC0 261 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 ICAM5Q9UMF0 924 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 PTGDR2Q9Y5Y4 395 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 ACTL7BQ9Y614 415 aa13.6□□□□□ -0.23
CHMP3-202ENST00000393773 IGHV3-15A0A0B4J1V0 119 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 G3V2L1 256 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 ZNF195O14628 629 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 ABCD4O14678 606 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 RGS14O43566 566 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 PRKD3O94806 890 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 FESP07332 822 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 C8BP07358 591 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 HPGDP15428 266 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 PRKCAP17252 672 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 SDC1P18827 310 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 PTNP21246 168 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 ENPP1P22413 925 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 NUDT6P53370 316 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 VLDLRP98155 873 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 PPA1Q15181 289 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 TOMM34Q15785 309 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 STK11Q15831 433 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 MTERF4Q7Z6M4 381 aaKnown RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 CCNYL1Q8N7R7 359 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 METTL2AQ96IZ6 378 aaKnown RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 CCT7Q99832 543 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 RHNO1Q9BSD3 238 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 CACNG6Q9BXT2 260 aa13.59□□□□□ -0.23
CHMP3-202ENST00000393773 HEATR1Q9H583 2144 aaKnown RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 RRAGDQ9NQL2 400 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 SIRT3Q9NTG7 399 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-202ENST00000393773 ELOA3DA6NLF2 546 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 GJE1A6NN92 205 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 HSPA4LO95757 839 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 GSTA1P08263 222 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ABHD2P08910 425 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ALOX5P09917 674 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SERPINB4P48594 390 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 RNF144AP50876 292 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SUMO3P55854 103 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 LOXL1Q08397 574 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SPOCK1Q08629 439 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SELENBP1Q13228 472 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 NDUFAF6Q330K2 333 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ELOA3BQ3SY89 546 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 TMEM176BQ3YBM2 270 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ZCCHC12Q6PEW1 402 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 SLC43A2Q8N370 569 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ELOA3Q8NG57 546 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 MZB1Q8WU39 189 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 CDS1Q92903 461 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 PPCDCQ96CD2 204 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF300Q96RE9 604 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 BTBD2Q9BX70 525 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 REEP4Q9H6H4 257 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 L2HGDHQ9H9P8 463 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 ACSS1Q9NUB1 689 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 KLHL9Q9P2J3 617 aa13.58□□□□□ -0.24
CHMP3-202ENST00000393773 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-202ENST00000393773 NPIPA5A0A0B4J1W7 369 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 FAM234BA2RU67 622 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 NPIPA7E9PJI5 369 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 H3BQF6 201 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 ETV2O00321 342 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-202ENST00000393773 SEC22BO75396 215 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 NPIPA8P0DM63 369 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 ZNF16P17020 682 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-202ENST00000393773 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-202ENST00000393773 P2RX1P51575 399 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 CASP9P55211 416 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 RAC3P60763 192 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 KLHL26Q53HC5 615 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 TIMM23BQ5SRD1 257 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 AGAP6Q5VW22 663 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 CLEC6AQ6EIG7 209 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 ZYG11AQ6WRX3 759 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 B3GLCTQ6Y288 498 aa13.57□□□□□ -0.24
CHMP3-202ENST00000393773 OR2T11Q8NH01 316 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms