RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 GDNFP39905 211 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ADH7P40394 386 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CSKP41240 450 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SPINT3P49223 89 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RAB13P51153 203 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CTSCP53634 463 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SMIM11AP58511 58 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TAS2R50P59544 299 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ERVFC1P60507 584 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RHOAP61586 193 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SEC61A1P61619 476 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 STXBP1P61764 594 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TBPL1P62380 186 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RPS15P62841 145 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BEX3Q00994 111 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RPL6Q02878 288 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PTSQ03393 145 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PLAURQ03405 335 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 HGFACQ04756 655 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 DUSP2Q05923 314 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FHL1Q13642 323 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 DDX39BQ13838 428 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GK2Q14410 553 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLBPQ14493 270 aaKnown RBP eCLIP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GPNMBQ14956 572 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MLC1Q15049 377 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MPPED2Q15777 294 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MAPK14Q16539 360 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GUCA2BQ16661 112 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PRAMEF19Q5SWL8 479 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 METTL11BQ5VVY1 283 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PRAMEF8Q5VWM4 474 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PRAMEF7Q5VXH5 474 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLC22A10Q63ZE4 541 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GDF6Q6KF10 455 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MED27Q6P2C8 311 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TNFAIP8L2Q6P589 184 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF704Q6ZNC4 412 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF600Q6ZNG1 722 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TPRG1Q6ZUI0 275 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SSX6Q7RTT6 188 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GPR142Q7Z601 462 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ADCK2Q7Z695 626 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 UBE3DQ7Z6J8 389 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 UBE2Q1Q7Z7E8 422 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SYT9Q86SS6 491 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TMPRSS11BQ86T26 416 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TMEM150AQ86TG1 271 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BIVMQ86UB2 503 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RTN4RL1Q86UN2 441 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FAM129CQ86XR2 697 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TMEM151BQ8IW70 566 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CMTM4Q8IZR5 234 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PUSL1Q8N0Z8 303 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PAQR4Q8N4S7 273 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RFLNBQ8N5W9 214 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LILRA3Q8N6C8 439 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LMNTD1Q8N9Z9 388 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 DNAAF1Q8NEP3 725 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 VPS37AQ8NEZ2 397 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BPIFCQ8NFQ6 507 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR6K2Q8NGY2 324 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR5J2Q8NH18 312 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR52I2Q8NH67 350 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MOSPD2Q8NHP6 518 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ABHD4Q8TB40 342 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TEX47Q8TBZ9 253 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BRIX1Q8TDN6 353 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF480Q8WV37 535 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 EDARADDQ8WWZ3 215 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SMPDL3AQ92484 453 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RGP1Q92546 391 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GCDHQ92947 438 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CLP1Q92989 425 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NEIL2Q969S2 332 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TM4SF18Q96CE8 201 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ELP4Q96EB1 424 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LRRC46Q96FV0 321 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OTUB1Q96FW1 271 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PEX11GQ96HA9 241 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PPP1R16AQ96I34 528 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MS4A4EQ96PG1 132 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SEPT5Q99719 369 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PRSS27Q9BQR3 290 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ALG8Q9BVK2 526 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SORBS1Q9BX66 1292 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MS4A8Q9BY19 250 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TM6SF2Q9BZW4 377 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ACTR6Q9GZN1 396 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 EGLN1Q9GZT9 426 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLC38A1Q9H2H9 487 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LRRN3Q9H3W5 708 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 C1orf198Q9H425 327 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FN3KQ9H479 309 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SAV1Q9H4B6 383 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RERGLQ9H628 205 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CCDC86Q9H6F5 360 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 WDR26Q9H7D7 661 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TBC1D17Q9HA65 648 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms