RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FAM86C2PA6NEL3 165 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SMIM10L1P0DMW3 83 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SLC16A1P53985 500 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 PARM1Q6UWI2 310 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 IL20RBQ6UXL0 311 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 GRPEL2Q8TAA5 225 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 ZFAND1Q8TCF1 268 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 PTP4A1Q93096 173 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SLC22A18Q96BI1 424 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 SMIM10Q96HG1 83 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 GFM1Q96RP9 751 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 MTIF3Q9H2K0 278 aaKnown RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 CYSLTR2Q9NS75 346 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 ACOXLQ9NUZ1 547 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 ZNF624Q9P2J8 865 aaPredicted RBP23.47■■□□□ 1.35
C9orf40-201ENST00000376854 KCNE5Q9UJ90 142 aa23.47■■□□□ 1.35
C9orf40-201ENST00000376854 PRR23D1E9PI22 279 aaPredicted RBP23.46■■□□□ 1.35
C9orf40-201ENST00000376854 CTSVO60911 334 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 RCBTB2O95199 551 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 LYPD3O95274 346 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 PRR23D2P0DMB1 279 aaPredicted RBP23.46■■□□□ 1.35
C9orf40-201ENST00000376854 LAMP2P13473 410 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 ARSBP15848 533 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 ADPRHP54922 357 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 FOXK2Q01167 660 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 FHL5Q5TD97 284 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 THSD4Q6ZMP0 1018 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 LRRC28Q86X40 367 aaPredicted RBP23.46■■□□□ 1.35
C9orf40-201ENST00000376854 AHCYL2Q96HN2 611 aaKnown RBP23.46■■□□□ 1.35
C9orf40-201ENST00000376854 OR51V1Q9H2C8 321 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 CMC2Q9NRP2 79 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 ING3Q9NXR8 418 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 SLC22A7Q9Y694 548 aa23.46■■□□□ 1.35
C9orf40-201ENST00000376854 ZNF860A6NHJ4 632 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 E9PI62 339 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 LINC01565O15544 149 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 MT-ND5P03915 603 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 TALDO1P37837 337 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 FAM27D1Q5T7N8 215 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 RD3Q7Z3Z2 195 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 COX18Q8N8Q8 333 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 OR13C2Q8NGS9 318 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 BPIFA2Q96DR5 249 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 NDC1Q9BTX1 674 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 ENAMQ9NRM1 1142 aa23.45■■□□□ 1.35
C9orf40-201ENST00000376854 CDHR4A6H8M9 788 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 POM121BA6NF01 834 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 LRRC72A6NJI9 287 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 SLC22A31A6NKX4 558 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 MRPL3P09001 348 aaKnown RBP23.45■■□□□ 1.34
C9orf40-201ENST00000376854 GZMKP49863 264 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 RRAS2P62070 204 aaPredicted RBP23.45■■□□□ 1.34
C9orf40-201ENST00000376854 GARNL3Q5VVW2 1013 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 CDK20Q8IZL9 346 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 DTX3Q8N9I9 347 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 OR4M1Q8NGD0 313 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 OR1E3Q8WZA6 343 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 TEAD3Q99594 435 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 INPP5EQ9NRR6 644 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 MCUBQ9NWR8 336 aa23.45■■□□□ 1.34
C9orf40-201ENST00000376854 INMT-MINDY4F8WBC2 141 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 K7EQS6 105 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 EIF4EP06730 217 aaKnown RBP23.44■■□□□ 1.34
C9orf40-201ENST00000376854 SAGP10523 405 aaPredicted RBP23.44■■□□□ 1.34
C9orf40-201ENST00000376854 FCRLBQ6BAA4 426 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 RPL13AP3Q6NVV1 102 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 TMEFF1Q8IYR6 380 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 FLVCR1-AS1Q8TAF5 88 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 CREB3L1Q96BA8 519 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 NIPAL2Q9H841 368 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 URADA6NGE7 173 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 LDB3O75112 727 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 CPNE3O75131 537 aaKnown RBP23.44■■□□□ 1.34
C9orf40-201ENST00000376854 C1QBP02746 253 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 BMP8BP34820 402 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 AGFG1P52594 562 aaKnown RBP23.44■■□□□ 1.34
C9orf40-201ENST00000376854 SLC3A1Q07837 685 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 ENPP7Q6UWV6 458 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 BMP8AQ7Z5Y6 402 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 SAMD12Q8N8I0 201 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 KCTD12Q96CX2 325 aaKnown RBP23.44■■□□□ 1.34
C9orf40-201ENST00000376854 GON7Q9BXV9 100 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 SATB2Q9UPW6 733 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 RASD1Q9Y272 281 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 SIGLEC7Q9Y286 467 aa23.44■■□□□ 1.34
C9orf40-201ENST00000376854 LANCL1O43813 399 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 THBS2P35442 1172 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 KIR2DL1P43626 348 aaPredicted RBP23.43■■□□□ 1.34
C9orf40-201ENST00000376854 RAB25P57735 213 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 OR10A3P58181 314 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 PPP2CBP62714 309 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 PPP2CAP67775 309 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 E2F1Q01094 437 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 GPR176Q14439 515 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 KIR2DS3Q14952 304 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 FIGNL1Q6PIW4 674 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 ASB18Q6ZVZ8 466 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 TMPRSS11FQ6ZWK6 438 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 CCL4L1Q8NHW4 92 aa23.43■■□□□ 1.34
C9orf40-201ENST00000376854 ARSGQ96EG1 525 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms