RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 NXPE2Q96DL1 559 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 LRRC46Q96FV0 321 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 PDXPQ96GD0 296 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 RBP7Q96R05 134 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 PFDN5Q99471 154 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 KATNB1Q9BVA0 655 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 DPAGT1Q9H3H5 408 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 NLGN3Q9NZ94 848 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SLC7A7Q9UM01 511 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 FKBP7Q9Y680 259 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 CHD5Q8TDI0 1954 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 A0A075B6Q4 140 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 A0A1W2PP55 124 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 HEPACAM2A8MVW5 462 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 HMGN4O00479 90 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 FKTNO75072 461 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SELLP14151 372 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 NDUFV2P19404 249 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 CMPK1P30085 196 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 FABP5Q01469 135 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
NCDN-202ENST00000373243 RASGRP3Q8IV61 690 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 VN1R2Q8NFZ6 395 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 OR11H4Q8NGC9 324 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 C1orf216Q8TAB5 229 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 ELP4Q96EB1 424 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 LYSMD1Q96S90 227 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 FUZQ9BT04 418 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 ESRP2Q9H6T0 727 aaKnown RBP11.31□□□□□ -0.6
NCDN-202ENST00000373243 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 A0A087WUU8 490 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 CDC123O75794 336 aaPredicted RBP11.31□□□□□ -0.6
NCDN-202ENST00000373243 OLFM2O95897 454 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 ACTR1BP42025 376 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SLC1A3P43003 542 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 PGDP52209 483 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 ACTR1AP61163 376 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 SLC7A9P82251 487 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 OR52N1Q8NH53 320 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 GINS4Q9BRT9 223 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 PCBD2Q9H0N5 130 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 CD93Q9NPY3 652 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 GNG8Q9UK08 70 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 TRAPPC4Q9Y296 219 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
NCDN-202ENST00000373243 FOXE1O00358 373 aaPredicted RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 FFAR1O14842 300 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 MAGEB4O15481 346 aaPredicted RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 CTSLP07711 333 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 EPCAMP16422 314 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SRP9P49458 86 aaKnown RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 SSTP61278 116 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 TCTN1Q2MV58 587 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 PLK5Q496M5 336 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 ARTNQ5T4W7 220 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SLC25A25Q6KCM7 469 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 PAQR7Q86WK9 346 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 OOSP2Q86WS3 158 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 ACOT4Q8N9L9 421 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 GPR137Q96N19 417 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SHARPINQ9H0F6 387 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SDHAF3Q9NRP4 125 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 AK6Q9Y3D8 172 aaKnown RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 PRAMEF25A6NGN4 478 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 TRIM3O75382 744 aaPredicted RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 MPC2O95563 127 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 FUT1P19526 365 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 GIFP27352 417 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 ETV6P41212 452 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 KCNJ3P48549 501 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 MPEG1Q2M385 716 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 VASNQ6EMK4 673 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 CREB3L4Q8TEY5 395 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 THAP7Q9BT49 309 aaPredicted RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 NXF2Q9GZY0 626 aaKnown RBP11.3□□□□□ -0.6
NCDN-202ENST00000373243 SRMSQ9H3Y6 488 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
NCDN-202ENST00000373243 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms