RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 LRIT2A6NDA9 550 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 GMDSO60547 372 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 AIFM1O95831 613 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 DEFB103AP81534 67 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 REEP5Q00765 189 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 FAAP20Q6NZ36 180 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 Q6ZTK2 550 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 C12orf40Q86WS4 652 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ING5Q8WYH8 240 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 PPP1R16AQ96I34 528 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 RDH8Q9NYR8 311 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 MARK1Q9P0L2 795 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 AK6Q9Y3D8 172 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 CASC3O15234 703 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 MAKP20794 623 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 MAGEB1P43366 347 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 HSF2Q03933 536 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 GRK1Q15835 563 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 CD276Q5ZPR3 534 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 RTL4Q6ZR62 310 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 GET4Q7L5D6 327 aaPredicted RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 OR4N5Q8IXE1 308 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 MS4A15Q8N5U1 240 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ZSWIM3Q96MP5 696 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 TEX12Q9BXU0 123 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 DPEP2Q9H4A9 486 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 TRIM36Q9NQ86 728 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 PHF11Q9UIL8 331 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 TSPAN11A1L157 253 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 CACNB4O00305 520 aaPredicted RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 TBX19O60806 448 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PCCBP05166 539 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PROS1P07225 676 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 POU3F2P20265 443 aaPredicted RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 BCL6P41182 706 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 FAM111BQ6SJ93 734 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 Q7L0L9 218 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 ACOT4Q8N9L9 421 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 OR51A7Q8NH64 312 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 FANK1Q8TC84 345 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 GHSRQ92847 366 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PTP4A1Q93096 173 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 PEX11GQ96HA9 241 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 CAMK1GQ96NX5 476 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 ARHGDIGQ99819 225 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 OR10A4Q9H209 315 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 NUBP2Q9Y5Y2 271 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 TP53BP1Q12888 1972 aaPredicted RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 TRAV27A0A087WT01 109 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 G3V3Q6 166 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 J3QRE1 110 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 IL9P15248 144 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 TEAD1P28347 426 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 STAT5AP42229 794 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 ACSM1Q08AH1 577 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 GPR68Q15743 365 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 TP53I3Q53FA7 332 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 MEPCEQ7L2J0 689 aaKnown RBP12.62□□□□□ -0.39
PRKN-205ENST00000366897 GRAMD2AQ8IUY3 354 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 OR13C2Q8NGS9 318 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 GANCQ8TET4 914 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 CDS1Q92903 461 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 SLC35A4Q96G79 324 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 OR2M2Q96R28 347 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 FAIM2Q9BWQ8 316 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
PRKN-205ENST00000366897 OR5K3A6NET4 321 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 VEGFCP49767 419 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 MAP2K6P52564 334 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 TSPAN5P62079 268 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 GNA13Q14344 377 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 COL28A1Q2UY09 1125 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 MBOAT2Q6ZWT7 520 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 NLRC3Q7RTR2 1065 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 KISS1RQ969F8 398 aaPredicted RBP12.61□□□□□ -0.39
PRKN-205ENST00000366897 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms