RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 PVALBP20472 110 aaPredicted RBP14.29□□□□□ -0.12
LMNA-201ENST00000347559 GALP22466 123 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 CTSCP53634 463 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 SWI5Q1ZZU3 235 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 FAM69AQ5T7M9 428 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 HES5Q5TA89 166 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 SPICQ8N5J4 248 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 MFFQ9GZY8 342 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 B4GALT6Q9UBX8 382 aa14.29□□□□□ -0.12
LMNA-201ENST00000347559 OR6C65A6NJZ3 312 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 GOSR2O14653 212 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 FLRT2O43155 660 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 MT-ND5P03915 603 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 EPXP11678 715 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 FUT1P19526 365 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 STARP49675 285 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 S100A12P80511 92 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 TNFRSF17Q02223 184 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SLC6A19Q695T7 634 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 FCRLBQ6BAA4 426 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 ZNF783Q6ZMS7 281 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 MRGPREQ86SM8 312 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 HAVCR2Q8TDQ0 301 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 CMSS1Q9BQ75 279 aaKnown RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 HCAR1Q9BXC0 346 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 CTSFQ9UBX1 484 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 GPR55Q9Y2T6 319 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 OR10H1Q9Y4A9 318 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 MPTX1A8MV57 137 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 PRAMEF2O60811 474 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 ADAM11O75078 769 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 STX11O75558 287 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 PRG2P13727 222 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 DCTDP32321 178 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SPINT3P49223 89 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 CLDN12P56749 244 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 H2BFSP57053 126 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 RIPPLY1Q0D2K3 151 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 DNAJB7Q7Z6W7 309 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 ZNF433Q8N7K0 673 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 DCAF4L2Q8NA75 395 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 TMEM185AQ8NFB2 350 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 THEM6Q8WUY1 208 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 F2RL3Q96RI0 385 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 TIMP4Q99727 224 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 ANKRD19PQ9H560 264 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SIRT3Q9NTG7 399 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 IL20Q9NYY1 176 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 NDRG3Q9UGV2 375 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 OR51B4Q9Y5P0 310 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 RASGRP1O95267 797 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 CHRM4P08173 479 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 RPL17P18621 184 aaKnown RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 MST1P26927 711 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 KCNJ3P48549 501 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SORDQ00796 357 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 TRAM2Q15035 370 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 PRSS55Q6UWB4 352 aaPredicted RBP14.28□□□□□ -0.12
LMNA-201ENST00000347559 Q6ZVL8 140 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 NAXDQ8IW45 347 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 OR2T33Q8NG76 320 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 OR4D10Q8NGI6 311 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 PLD4Q96BZ4 506 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 ZG16BQ96DA0 208 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 EFCAB11Q9BUY7 163 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 SLC19A3Q9BZV2 496 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 BIN3Q9NQY0 253 aa14.28□□□□□ -0.12
LMNA-201ENST00000347559 A0A0G2JPF8 293 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 ABHD14A-ACY1A0A1B0GW23 586 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 FOXE1O00358 373 aaPredicted RBP14.27□□□□□ -0.12
LMNA-201ENST00000347559 SMAD9O15198 467 aaKnown RBP14.27□□□□□ -0.12
LMNA-201ENST00000347559 SOCS5O75159 536 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 CDC123O75794 336 aaPredicted RBP14.27□□□□□ -0.12
LMNA-201ENST00000347559 HNRNPCL4P0DMR1 293 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 LASP1Q14847 261 aaKnown RBP14.27□□□□□ -0.12
LMNA-201ENST00000347559 TMEM44Q2T9K0 475 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 FAM26DQ5JW98 314 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 OR7E24Q6IFN5 339 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 SLC25A28Q96A46 364 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 LCORQ96JN0 433 aaPredicted RBP14.27□□□□□ -0.12
LMNA-201ENST00000347559 CWH43Q9H720 699 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 OPN4Q9UHM6 478 aa14.27□□□□□ -0.12
LMNA-201ENST00000347559 SCN8AQ9UQD0 1980 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 UBE2QL1A1L167 161 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 OR2W5A6NFC9 320 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 SGCEO43556 437 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 ATP1B1P05026 303 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 OMPP47874 163 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 UBXN2BQ14CS0 331 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 DCAF12L2Q5VW00 463 aa14.27□□□□□ -0.13
LMNA-201ENST00000347559 FAM83HQ6ZRV2 1179 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms