RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ACOT12Q8WYK0 555 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 PMM1Q92871 262 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 BPIFA2Q96DR5 249 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SIPA1Q96FS4 1042 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 KCNJ15Q99712 375 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 INPP5EQ9NRR6 644 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 MALT1Q9UDY8 824 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SIGLEC7Q9Y286 467 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TMEM5Q9Y2B1 443 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SPACA6W5XKT8 324 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TRIOBPQ9H2D6 2365 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 NPIPA5A0A0B4J1W7 369 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 ZC3H12DA2A288 527 aaKnown RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 OR6C74A6NCV1 312 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SLC22A31A6NKX4 558 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 NPIPA7E9PJI5 369 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 H0YGG7 62 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 CYR61O00622 381 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TNFRSF10CO14798 259 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 BRINP1O60477 761 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SLC19A2O60779 497 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 RASGRP1O95267 797 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 KLF8O95600 359 aaPredicted RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 IFI6P09912 130 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 NPIPA8P0DM63 369 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 ARF3P61204 181 aaPredicted RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 MRPS15P82914 257 aaKnown RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 GALEQ14376 348 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 NR2C2APQ86WQ0 139 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TMEFF1Q8IYR6 380 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 CDK20Q8IZL9 346 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TMEM99Q8N816 258 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TMEM52Q8NDY8 209 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 DUSP18Q8NEJ0 188 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 DOK4Q8TEW6 326 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 FAM3CQ92520 227 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 DMRTB1Q96MA1 342 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 TMEM43Q9BTV4 400 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 MAT2BQ9NZL9 334 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 NCKAP1Q9Y2A7 1128 aa13.49□□□□□ -0.25
TDP2-201ENST00000341060 SIRT4Q9Y6E7 314 aaPredicted RBP13.49□□□□□ -0.25
TDP2-201ENST00000341060 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 GPR75O95800 540 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 FAM157BP0CG42 384 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PRKAR1AP10644 381 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 NT5EP21589 574 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 HNRNPA2B1P22626 353 aaKnown RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 FOXK2Q01167 660 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PLAURQ03405 335 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 HYAL1Q12794 435 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 MZT2BQ6NZ67 158 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 SHISA5Q8N114 240 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 SLC37A3Q8NCC5 494 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 ZFPM2Q8WW38 1151 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PTP4A1Q93096 173 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 AHCYL2Q96HN2 611 aaKnown RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 CD93Q9NPY3 652 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 NUFIP1Q9UHK0 495 aaKnown RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PRR23D1E9PI22 279 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 SGK494L7N484 410 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 LYRM1O43325 122 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PRR23D2P0DMB1 279 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 SAGP10523 405 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 CD53P19397 219 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 F8A1P23610 371 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 CTBP2P56545 445 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 SHC2P98077 582 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 MGAT2Q10469 447 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 EXOSC7Q15024 291 aaKnown RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 CDK10Q15131 360 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 HBMQ6B0K9 141 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 ZNF613Q6PF04 617 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 FIGNL1Q6PIW4 674 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 TRILQ7L0X0 811 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 TRIM48Q8IWZ4 208 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 ZNF655Q8N720 491 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 NLGN4YQ8NFZ3 816 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 BAHD1Q8TBE0 780 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 CTHRC1Q96CG8 243 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 ART5Q96L15 291 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 TBX5Q99593 518 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 IFT27Q9BW83 186 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 ZNF576Q9H609 170 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 RANGRFQ9HD47 186 aaPredicted RBP13.48□□□□□ -0.25
TDP2-201ENST00000341060 MEPEQ9NQ76 525 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms