RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.76□□□□□ -0.21
UBA1-201ENST00000335972 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 Q8N402 240 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 GFM1Q96RP9 751 aaKnown RBP13.76□□□□□ -0.21
UBA1-201ENST00000335972 SARGQ9BW04 601 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 PHF11Q9UIL8 331 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 CCDC182A6NF36 153 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 J3QLW9 94 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 STX11O75558 287 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 SLC2A2P11168 524 aaPredicted RBP13.76□□□□□ -0.21
UBA1-201ENST00000335972 ZNF19P17023 458 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 BMP7P18075 431 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 MRGPREQ86SM8 312 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 RANBP3LQ86VV4 465 aaPredicted RBP13.76□□□□□ -0.21
UBA1-201ENST00000335972 CSNK1A1LQ8N752 337 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 ATF6BQ99941 703 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 FN3KQ9H479 309 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 KLHL1Q9NR64 748 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 PIAS3Q9Y6X2 628 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 DAPL1A0PJW8 107 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 TRAPPC13A5PLN9 417 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 IDH3BO43837 385 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 PAHP00439 452 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 HTR1FP30939 366 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 KRR1Q13601 381 aaKnown RBP13.76□□□□□ -0.21
UBA1-201ENST00000335972 ASB18Q6ZVZ8 466 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 PARGQ86W56 976 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 ZNF619Q8N2I2 560 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 CHAC2Q8WUX2 184 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 BPIFA2Q96DR5 249 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 WACQ9BTA9 647 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
UBA1-201ENST00000335972 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 DTX4Q9Y2E6 619 aa13.76□□□□□ -0.21
UBA1-201ENST00000335972 STK25O00506 426 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 OR10H2O60403 315 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 TNFRSF4P43489 277 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 FAM53BQ14153 422 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 EOGTQ5NDL2 527 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 RNLSQ5VYX0 342 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 GATSQ8NAP1 163 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 OR52L1Q8NGH7 329 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ENKURQ8TC29 256 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SLC37A2Q8TED4 501 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 TM4SF19Q96DZ7 209 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 GABRG3Q99928 467 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 PIGUQ9H490 435 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 NLKQ9UBE8 527 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 PCDHGB2Q9Y5G2 931 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 A0A0A6YYC8 382 aaPredicted RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 A0A0B4J203 849 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 I3L1I5 382 aaPredicted RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 AKAP8O43823 692 aaKnown RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 HNRNPA2B1P22626 353 aaKnown RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 CRMP1Q14194 572 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ZNF544Q6NX49 715 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 MTFR2Q6P444 385 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 TAF8Q7Z7C8 310 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 UBE2Q1Q7Z7E8 422 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SLC22A18ASQ8N1D0 253 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SCAIQ8N9R8 606 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 CAMKVQ8NCB2 501 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SLC37A3Q8NCC5 494 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 RLN3Q8WXF3 142 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SCARF2Q96GP6 870 aaPredicted RBP13.75□□□□□ -0.21
UBA1-201ENST00000335972 HS6ST2Q96MM7 605 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 B4DXG7 233 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 PSMD9O00233 223 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SMIM10L1P0DMW3 83 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 IL9P15248 144 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 OR12D2P58182 307 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ILF3Q12906 894 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■■■■□ 25.5
UBA1-201ENST00000335972 KIR2DS3Q14952 304 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 PRAMEF8Q5VWM4 474 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 PRAMEF7Q5VXH5 474 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 TRIQKQ629K1 86 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 NIPAL3Q6P499 406 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 XKRXQ6PP77 449 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 USP53Q70EK8 1073 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ABHD13Q7L211 337 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ARIH2OSQ8N7S6 290 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ORAI1Q96D31 301 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SMIM10Q96HG1 83 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ST6GAL2Q96JF0 529 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 WDFY2Q96P53 400 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ZNF559Q9BR84 538 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 ZNF350Q9GZX5 532 aa13.75□□□□□ -0.21
UBA1-201ENST00000335972 SLC28A3Q9HAS3 691 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms