RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 C13orf42A0A1B0GVH6 325 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 A0A1W2PRQ8 180 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 POM121BA6NF01 834 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 I3L1I5 382 aaPredicted RBP14.27□□□□□ -0.12
VARS2-201ENST00000321897 LIPCP11150 499 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 PRDX1Q06830 199 aaKnown RBP14.27□□□□□ -0.12
VARS2-201ENST00000321897 MLLT11Q13015 90 aaPredicted RBP14.27□□□□□ -0.12
VARS2-201ENST00000321897 LRIF1Q5T3J3 769 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 Q6ZNB5 142 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 CCDC190Q86UF4 302 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 LMX1AQ8TE12 382 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 DPYSL5Q9BPU6 564 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 ZDHHC5Q9C0B5 715 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 MVB12BQ9H7P6 319 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 SLC6A14Q9UN76 642 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 ZNF432O94892 652 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 GBX1Q14549 363 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 FIGLAQ6QHK4 219 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 ABHD13Q7L211 337 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 SLC22A18Q96BI1 424 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 OPALINQ96PE5 141 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 TGM7Q96PF1 710 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 MNTQ99583 582 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 RAB11FIP5Q9BXF6 653 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 TMEM184CQ9NVA4 438 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 A3GALT2U3KPV4 340 aa14.27□□□□□ -0.12
VARS2-201ENST00000321897 RHPN2P1A8MT19 583 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 F5H0A9 414 aaPredicted RBP14.27□□□□□ -0.13
VARS2-201ENST00000321897 ERVH48-1M5A8F1 160 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 XKRYO14609 159 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 MAGEB4O15481 346 aaPredicted RBP14.27□□□□□ -0.13
VARS2-201ENST00000321897 PPP1R3DO95685 299 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 UCHL1P09936 223 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 GUCA1AP43080 201 aaPredicted RBP14.27□□□□□ -0.13
VARS2-201ENST00000321897 GPR50Q13585 617 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 SMCO1Q147U7 214 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 ZNF627Q7L945 461 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 ZNF527Q8NB42 609 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 ST8SIA4Q92187 359 aa14.27□□□□□ -0.13
VARS2-201ENST00000321897 GABRPO00591 440 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 FCMRO60667 390 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 MT-ND5P03915 603 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 M6PRP20645 277 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SHC1P29353 583 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PSMB10P40306 273 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 TP53I3Q53FA7 332 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 ESPNLQ6ZVH7 1005 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 ABI3BPQ7Z7G0 1075 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PAQR7Q86WK9 346 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 NRSN1Q8IZ57 195 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 CSNK1A1LQ8N752 337 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 UBTD2Q8WUN7 234 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 RBPMSQ93062 196 aaKnown RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 HSPA12BQ96MM6 686 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PTCHD1Q96NR3 888 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SYNPO2LQ9H987 977 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 MKKSQ9NPJ1 570 aaPredicted RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 ZNF639Q9UID6 485 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 KLHL21Q9UJP4 597 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 TRBV5-4A0A0C4DH59 114 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 CREBL2O60519 120 aaPredicted RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 FARS2O95363 451 aaKnown RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 NTN1O95631 604 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SNRPBP14678 240 aaKnown RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 ZNF3P17036 446 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 GRK1Q15835 563 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 TMEM64Q6YI46 380 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 KCTD9Q7L273 389 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 ARMC10Q8N2F6 343 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 ZNF566Q969W8 418 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SLC41A3Q96GZ6 507 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 B3GNT2Q9NY97 397 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 RCE1Q9Y256 329 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PRICKLE3O43900 615 aaPredicted RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 NDUFV2P19404 249 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 FUT1P19526 365 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 GNALP38405 381 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 GBX2P52951 348 aaPredicted RBP14.26□□□□□ -0.13
VARS2-201ENST00000321897 ADAM8P78325 824 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 LSM11P83369 360 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■■□ 22.2
VARS2-201ENST00000321897 GGTA1PQ4G0N0 100 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 C1orf189Q5VU69 101 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PRSS45Q7RTY3 260 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SYT9Q86SS6 491 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SDR9C7Q8NEX9 313 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 OR5T3Q8NGG3 340 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 ZNF559Q9BR84 538 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 SLC25A18Q9H1K4 315 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 NKX2-4Q9H2Z4 354 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 TRPV4Q9HBA0 871 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 PRKYO43930 277 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 CSTAP01040 98 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 OPN1LWP04000 364 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 HNRNPA1P09651 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
VARS2-201ENST00000321897 NTSR1P30989 418 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 AKR1C2P52895 323 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 CLDN12P56749 244 aa14.26□□□□□ -0.13
VARS2-201ENST00000321897 AKR1C1Q04828 323 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms