RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TMEM92Q6UXU6 159 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 GPAT4Q86UL3 456 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 LRRC17Q8N6Y2 441 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 ADAMTS15Q8TE58 950 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 CDS1Q92903 461 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 ERVMER34-1Q9H9K5 563 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 LIN7BQ9HAP6 207 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 NDOR1Q9UHB4 597 aa14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 DIMT1Q9UNQ2 313 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-201ENST00000319854 CENPVL1A0A0U1RR11 272 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 SGK494L7N484 410 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 FAAHO00519 579 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 NR2F6P10588 404 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ELK1P19419 428 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 FRKP42685 505 aaPredicted RBP14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 GPR4P46093 362 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 CTAG1AP78358 180 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 PRR5P85299 388 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 CSTF1Q05048 431 aaKnown RBP14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ZIC1Q15915 447 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 SYT14P1Q58G82 188 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 SLC30A8Q8IWU4 369 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF614Q8N883 585 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 OR7G2Q8NG99 324 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 OR8J1Q8NGP2 316 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ELP4Q96EB1 424 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 BMFQ96LC9 184 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 GHITMQ9H3K2 345 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 CLEC1BQ9P126 229 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 SLC30A4O14863 429 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 RAB36O95755 333 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 RRASP10301 218 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 BTCP35070 178 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 SRP9P49458 86 aaKnown RBP14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ZNF81P51508 661 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 WNT4P56705 351 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 GPR18Q14330 331 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ARSKQ6UWY0 536 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 GPALPP1Q8IXQ4 340 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 DEFB119Q8N690 84 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 HSD17B8Q92506 261 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 TMED9Q9BVK6 235 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 RAB11FIP5Q9BXF6 653 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 MAN2C1Q9NTJ4 1040 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 ADAM29Q9UKF5 820 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 MGAT4BQ9UQ53 548 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 CLCA2Q9UQC9 943 aa14.46□□□□□ -0.09
SHROOM1-201ENST00000319854 TCRBV21S2A2A0A5A6 115 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 PRICKLE3O43900 615 aaPredicted RBP14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 HRGP04196 525 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 NDUFV2P19404 249 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 TRHRP34981 398 aaPredicted RBP14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 STXBP1P61764 594 aaKnown RBP14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 IKZF1Q13422 519 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 ENPP2Q13822 863 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 AGERQ15109 404 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 TRMT12Q53H54 448 aaKnown RBP14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 FBXW5Q969U6 566 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 MS4A7Q9GZW8 240 aaPredicted RBP14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 RNF32Q9H0A6 362 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 ENOPH1Q9UHY7 261 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 MSRAQ9UJ68 235 aa14.46□□□□□ -0.1
SHROOM1-201ENST00000319854 GPR89AB7ZAQ6 455 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 HYAL3O43820 417 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC35G6P0C7Q6 338 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 GPR89BP0CG08 455 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 CLLU1Q5K131 121 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 GARNL3Q5VVW2 1013 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 RNLSQ5VYX0 342 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 FBXO42Q6P3S6 717 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 ASPGQ86U10 573 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 LINC00052Q96N35 136 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 ZNF582Q96NG8 517 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 RANBP3Q9H6Z4 567 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 NT5DC2Q9H857 520 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 TBC1D17Q9HA65 648 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 FOLH1BQ9HBA9 442 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 NUDT15Q9NV35 164 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 CABIN1Q9Y6J0 2220 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 ALPK2Q86TB3 2170 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 A0A087WUU8 490 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 OR2W5A6NFC9 320 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM170BA6NMN3 283 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 NUPL2O15504 423 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 PPM1BO75688 479 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 FUT1P19526 365 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 RGS8P57771 180 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 TPBGQ13641 420 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC30A6Q6NXT4 461 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 IL20RBQ6UXL0 311 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM92BQ6ZTR7 304 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 PRICKLE2Q7Z3G6 844 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 NKAIN4Q8IVV8 208 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 SMAD5Q99717 465 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC38A1Q9H2H9 487 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 SEMA4GQ9NTN9 838 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 ZSCAN32Q9NX65 697 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 TAS2R7Q9NYW3 318 aa14.45□□□□□ -0.1
SHROOM1-201ENST00000319854 TRIOBPQ9H2D6 2365 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms