RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 LMF2Q9BU23 707 aaKnown RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 KIR3DX1Q9H7L2 352 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PRDM9Q9NQV7 894 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MED11Q9P086 117 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 NKX1-2Q9UD57 310 aaPredicted RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 LRRC42Q9Y546 428 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 APC2O95996 2303 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 TMEM221A6NGB7 291 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 OR2AT4A6NND4 320 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 M0R296 226 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PRRG2O14669 202 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 SSTR4P31391 388 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MAP2K4P45985 399 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 ENTPD8Q5MY95 495 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 HDHD5Q9BXW7 423 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 NRSN2Q9GZP1 204 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 OR10A2Q9H208 303 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 SCP2D1Q9UJQ7 156 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 RGPD4Q7Z3J3 1758 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PTHP01270 115 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 IGHG1P01857 330 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 GLB1P16278 677 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 GGT1P19440 569 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MAN2A2P49641 1150 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 NKX3-2P78367 333 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MVKQ03426 396 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CDNFQ49AH0 187 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MAGIXQ9H6Y5 334 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CSO75390 466 aaKnown RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 CAPN3P20807 821 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 DCKP27707 260 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 OR1Q1Q15612 314 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 VWA2Q5GFL6 755 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CCDC74BQ96LY2 380 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 RP1P56715 2156 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 STSP08842 583 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 IFNGR1P15260 489 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CNR2P34972 360 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 OR8J1Q8NGP2 316 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 OR5AK2Q8NH90 309 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 CMAHPQ9Y471 501 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 NUDT21O43809 227 aaKnown RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 TIMM8AO60220 97 aaPredicted RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 PENKP01210 267 aaPredicted RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 DBHP09172 617 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 ROR2Q01974 943 aaKnown RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 AGAP7PQ5VUJ5 663 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 VASNQ6EMK4 673 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 MFSD8Q8NHS3 518 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 SFXN5Q8TD22 340 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 AGAP4Q96P64 663 aa12.62□□□□□ -0.39
RFFL-201ENST00000315249 QRSL1Q9H0R6 528 aaKnown RBP12.62□□□□□ -0.39
RFFL-201ENST00000315249 MKRN2OSH3BPM6 223 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 SLC43A1O75387 559 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 UTS2O95399 124 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 F13BP05160 661 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 GYPBP06028 91 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 TPTEP56180 551 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 CCL7P80098 99 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 TRAM1Q15629 374 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 SYPL1Q16563 259 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 OR5M1Q8NGP8 315 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 C8orf44Q96CB5 159 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 BPIFA2Q96DR5 249 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 NMNAT1Q9HAN9 279 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 CCRL2O00421 344 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 BCL6P41182 706 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 DHRS13Q6UX07 377 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 PIGCQ92535 297 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 UCN3Q969E3 161 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 FUZQ9BT04 418 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 SLC16A7O60669 478 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 DIRAS3O95661 229 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 SFTPBP07988 381 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 ANXA3P12429 323 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 CD1CP29017 333 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 PUDPQ08623 228 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 CAMK2DQ13557 499 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 MED25Q71SY5 747 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 AAED1Q7RTV5 226 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 GLSO94925 669 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 MTHFD2P13995 350 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 MZT1Q08AG7 82 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 ZNF750Q32MQ0 723 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 HBMQ6B0K9 141 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 SLC16A14Q7RTX9 510 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms