RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ALOX12BO75342 701 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 SEC14L2O76054 403 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 UTS2O95399 124 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 SNRPGP62308 76 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 IL11RAQ14626 422 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 DCUN1D5Q9BTE7 237 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 PLA2G12AQ9BZM1 189 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 RPL36Q9Y3U8 105 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 PEX14O75381 377 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 CH25HO95992 272 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 CDK1P06493 297 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 GABRB1P18505 474 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 RANBP1P43487 201 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 NRG3P56975 720 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 EBPQ15125 230 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 ACSM5Q6NUN0 579 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 ULK3Q6PHR2 472 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 OVCH1Q7RTY7 1134 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 PFN4Q8NHR9 129 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 FAR1Q8WVX9 515 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 FCGR1BQ92637 280 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 ACOT13Q9NPJ3 140 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 IL20RAQ9UHF4 553 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 PCDHGB1Q9Y5G3 927 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 MEN1O00255 615 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 UBL4AP11441 157 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 HSDL2Q6YN16 418 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 KIF18BQ86Y91 864 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 LRR1Q96L50 414 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 TBL1XR1Q9BZK7 514 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 WWTR1Q9GZV5 400 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 CDH10Q9Y6N8 788 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 R4GN57 208 aa13.36□□□□□ -0.27
SHCBP1-201ENST00000303383 OR6C76A6NM76 312 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 FLRT2O43155 660 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 PCMT1P22061 227 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 DCKP27707 260 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 MEDAGQ5VYS4 303 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 C9orf40Q8IXQ3 194 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 FANK1Q8TC84 345 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 LPAR4Q99677 370 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 PRSS27Q9BQR3 290 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 C19orf25Q9UFG5 118 aaPredicted RBP13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 A0A0B4J2E0 115 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 A0A1B0GX12 115 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 NPIPB9F8W1W9 429 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 NUDT14O95848 222 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 TP53P04637 393 aaPredicted RBP13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC5A2P31639 672 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 MLLT10P55197 1068 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 CDK5Q00535 292 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 OR2T33Q8NG76 320 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 MR1Q95460 341 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC35B4Q969S0 331 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 LOXL4Q96JB6 756 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
SHCBP1-201ENST00000303383 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 EFCAB9A8MZ26 197 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 PRKYO43930 277 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 RCBTB2O95199 551 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 CCNA2P20248 432 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ACAA2P42765 397 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 GPR143P51810 404 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 TMBIM6P55061 237 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 THAP3Q8WTV1 239 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ADIPOR1Q96A54 375 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 SH3YL1Q96HL8 342 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 CARD8Q9Y2G2 431 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 GMFGO60234 142 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 HSMCR30P0CW71 290 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ITPKBP27987 946 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 EFNA3P52797 238 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 PAPD4Q6PIY7 484 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 WDR88Q6ZMY6 472 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF620Q6ZNG0 422 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ANKRD37Q7Z713 158 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 SLC34A3Q8N130 599 aa13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 DNAJA4Q8WW22 397 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-201ENST00000303383 HSPBAP1Q96EW2 488 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms