RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 BDKRB2P30411 391 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 MPIP34949 423 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 RPL3P39023 403 aaKnown RBP13.45□□□□□ -0.26
CDT1-201ENST00000301019 CCR9P51686 369 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 TAF10Q12962 218 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
CDT1-201ENST00000301019 ZDHHC20Q5W0Z9 365 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 GLT8D1Q68CQ7 371 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 FAM109BQ6ICB4 259 aaPredicted RBP13.45□□□□□ -0.26
CDT1-201ENST00000301019 PRICKLE2Q7Z3G6 844 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 FAM26EQ8N5C1 309 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 PDXPQ96GD0 296 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 MEGF10Q96KG7 1140 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 CXorf36Q9H7Y0 433 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 ATG4BQ9Y4P1 393 aa13.45□□□□□ -0.26
CDT1-201ENST00000301019 ARL5CA6NH57 179 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 F5H5T6 163 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 EFCAB14O75071 495 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 RFC3P40938 356 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 GAS1P54826 345 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 RHOAP61586 193 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 TAF13Q15543 124 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 GPRC6AQ5T6X5 926 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 SPAG16Q8N0X2 631 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 OR52N2Q8NGI0 321 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 NUBPLQ8TB37 319 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 DOK4Q8TEW6 326 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 DUSP19Q8WTR2 217 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 CHST6Q9GZX3 395 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 ZFYVE1Q9HBF4 777 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 OR12D2P58182 307 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
CDT1-201ENST00000301019 BEX3Q00994 111 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 RAB40BQ12829 278 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 ODF4Q2M2E3 257 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 REEP3Q6NUK4 255 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
CDT1-201ENST00000301019 ALG8Q9BVK2 526 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 GPR174Q9BXC1 333 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 POLDIP3Q9BY77 421 aaKnown RBP13.44□□□□□ -0.26
CDT1-201ENST00000301019 FAM124BQ9H5Z6 455 aaPredicted RBP13.44□□□□□ -0.26
CDT1-201ENST00000301019 UNKLQ9H9P5 680 aaKnown RBP13.44□□□□□ -0.26
CDT1-201ENST00000301019 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 PTTG3PQ9NZH4 202 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 FBXL4Q9UKA2 621 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 TSC2P49815 1807 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 DSPPQ9NZW4 1301 aa13.44□□□□□ -0.26
CDT1-201ENST00000301019 KCNE1BA0A087WTH5 132 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 DAPL1A0PJW8 107 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 TMEM202A6NGA9 273 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 FAM170BA6NMN3 283 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ANXA2P07355 339 aaKnown RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 TACR2P21452 398 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 NOS3P29474 1203 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 HLA-FP30511 346 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 RPS15P62841 145 aaKnown RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 KRBOX4Q5JUW0 171 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF322Q6U7Q0 402 aaPredicted RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 EQTNQ9NQ60 294 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 GULP1Q9UBP9 304 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 TMEM129A0AVI4 362 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 MEX3AA1L020 520 aaKnown RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 PRKRAO75569 313 aaKnown RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 RHOCP08134 193 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 IL3P08700 152 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 KCNE1P15382 129 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 OCLNQ16625 522 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 FIGNL1Q6PIW4 674 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 OR10R2Q8NGX6 335 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 HCAR1Q9BXC0 346 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 SLC6A16Q9GZN6 736 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ASIC5Q9NY37 505 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF197O14709 1029 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 MMP3P08254 477 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 SMIM10L2AP0DMW4 78 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 SMIM10L2BP0DMW5 78 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ST6GAL1P15907 406 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF124Q15973 351 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ACSM3Q53FZ2 586 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF311Q5JNZ3 666 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZNF546Q86UE3 836 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 CMTM4Q8IZR5 234 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 ARL14Q8N4G2 192 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 OR5T2Q8NGG2 359 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 OR5W2Q8NH69 310 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 C1orf216Q8TAB5 229 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 C14orf79Q96F83 325 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDT1-201ENST00000301019 ZC3H10Q96K80 434 aaKnown RBP13.43□□□□□ -0.26
CDT1-201ENST00000301019 IFT27Q9BW83 186 aa13.43□□□□□ -0.26
CDT1-201ENST00000301019 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms