RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 C19orf57Q0VDD7 668 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 HNRNPA0Q13151 305 aaKnown RBP20.33■□□□□ 0.84
TPM4-201ENST00000300933 ASAH1Q13510 395 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 LARS2Q15031 903 aaKnown RBP20.33■□□□□ 0.84
TPM4-201ENST00000300933 SLC35F1Q5T1Q4 408 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 PRAMEF8Q5VWM4 474 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 PRAMEF7Q5VXH5 474 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 WDR88Q6ZMY6 472 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 RDH10Q8IZV5 341 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 ARL14Q8N4G2 192 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 TEX47Q8TBZ9 253 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 GON7Q9BXV9 100 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 SEMA6CQ9H3T2 930 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 PIGUQ9H490 435 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 NDOR1Q9UHB4 597 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 OR5K4A6NMS3 321 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ATP1B1P05026 303 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 HTR2AP28223 471 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ZNF136P52737 540 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 TEKQ02763 1124 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 DUSP8Q13202 625 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 TDGQ13569 410 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 QPRTQ15274 297 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 SPHARQ15513 63 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 BTBD16Q32M84 506 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 CCDC28AQ8IWP9 274 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 C19orf47Q8N9M1 422 aaKnown RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 PHF7Q9BWX1 381 aaPredicted RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 MIXL1Q9H2W2 232 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ATP13A2Q9NQ11 1180 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 RPL36Q9Y3U8 105 aaKnown RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 HYAL3O43820 417 aaPredicted RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 IGLV3-19P01714 112 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ETV5P41161 510 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ETV1P50549 477 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 GLYR1Q49A26 553 aaPredicted RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 OR2G6Q5TZ20 316 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 SAMD14Q8IZD0 417 aaPredicted RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 NLGN4YQ8NFZ3 816 aaPredicted RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 ZFAND1Q8TCF1 268 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 ZFPM2Q8WW38 1151 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 POLR2J2Q9GZM3 115 aaKnown RBP20.32■□□□□ 0.84
TPM4-201ENST00000300933 MALT1Q9UDY8 824 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 DTX4Q9Y2E6 619 aa20.32■□□□□ 0.84
TPM4-201ENST00000300933 PLA2G10O15496 165 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 ARHGEF9O43307 516 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 PSKH1P11801 424 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 MLLT3P42568 568 aaPredicted RBP20.31■□□□□ 0.84
TPM4-201ENST00000300933 SMSP52788 366 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 EEF1A1P68104 462 aaKnown RBP20.31■□□□□ 0.84
TPM4-201ENST00000300933 ZNF155Q12901 538 aaPredicted RBP20.31■□□□□ 0.84
TPM4-201ENST00000300933 TATDN3Q17R31 274 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 SLC27A4Q6P1M0 643 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 FAM109AQ8N4B1 249 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 OR52I1Q8NGK6 324 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 OR4Q3Q8NH05 313 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 PFN4Q8NHR9 129 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 PIGXQ8TBF5 258 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 GNPDA2Q8TDQ7 276 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 TGM7Q96PF1 710 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 ENKD1Q9H0I2 346 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 CLCA3PQ9Y6N3 262 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 THADAQ6YHU6 1953 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 FAM183AA6NL82 134 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 ZNF670-ZNF695F2Z2N8 137 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 STX11O75558 287 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 MYF5P13349 255 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 UQCRC1P31930 480 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 CD300LDQ6UXZ3 194 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 HSDL2Q6YN16 418 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 POLDIP3Q9BY77 421 aaKnown RBP20.31■□□□□ 0.84
TPM4-201ENST00000300933 UBE2ZQ9H832 354 aaPredicted RBP20.31■□□□□ 0.84
TPM4-201ENST00000300933 C20orf141Q9NUB4 165 aa20.31■□□□□ 0.84
TPM4-201ENST00000300933 CBX7O95931 251 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 GLULP15104 373 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 ERP29P30040 261 aaKnown RBP20.3■□□□□ 0.84
TPM4-201ENST00000300933 CSTF2P33240 577 aaKnown RBP eCLIP20.3■□□□□ 0.84
TPM4-201ENST00000300933 CD79BP40259 229 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 TSPAN31Q12999 210 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 KCNAB1Q14722 419 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 TMEM201Q5SNT2 666 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 BBS1Q8NFJ9 593 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 OR4M1Q8NGD0 313 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 OR9Q1Q8NGQ5 310 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 ANGPTL6Q8NI99 470 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 DPH1Q9BZG8 443 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 ZNF350Q9GZX5 532 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 CSNK1G3Q9Y6M4 447 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 TSC22D2O75157 780 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 NAT1P18440 290 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 MAOAP21397 527 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 BLKP51451 505 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.3■□□□□ 0.84
TPM4-201ENST00000300933 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.3■□□□□ 0.846e-7■■■□□ 19.1
TPM4-201ENST00000300933 C22orf42Q6IC83 251 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 PLET1Q6UQ28 207 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 FAM26EQ8N5C1 309 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 GRHL3Q8TE85 626 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 ACOT11Q8WXI4 607 aaPredicted RBP20.3■□□□□ 0.84
TPM4-201ENST00000300933 CACYBPQ9HB71 228 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms