RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MSCO60682 206 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 UBL3O95164 117 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 NPSP0C0P6 89 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 STAG3L1P0CL83 205 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 RAB5AP20339 215 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 GABRR2P28476 465 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 GDNFP39905 211 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 GAS1P54826 345 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 SORDQ00796 357 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OCLNQ16625 522 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 GFOD2Q3B7J2 385 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TIGD5Q53EQ6 642 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 DPPA4Q7L190 304 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF227Q86WZ6 799 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM192Q8IY95 271 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 RNF149Q8NC42 400 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 HUS1BQ8NHY5 278 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 MFSD1Q9H3U5 465 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM185BQ9H7F4 350 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 NMNAT1Q9HAN9 279 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-201ENST00000274071 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 PIGVQ9NUD9 493 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 RCC2Q9P258 522 aaKnown RBP8.6□□□□□ -1.03
PDGFC-201ENST00000274071 MCIDASD6RGH6 385 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 M0QYT0 321 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 RGS14O43566 566 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 NFATC1O95644 943 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OR12D1P0DN82 309 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OR1G1P47890 313 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 LIMS1P48059 325 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ARHGEF7Q14155 803 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TTLL4Q14679 1199 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 C18orf21Q32NC0 220 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-201ENST00000274071 KRBOX4Q5JUW0 171 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ATXN7L2Q5T6C5 722 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF813Q6ZN06 617 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 DNAAF1Q8NEP3 725 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OR10D4PQ8NGN7 298 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TRAPPC12Q8WVT3 735 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 EDEM1Q92611 657 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 RAB24Q969Q5 203 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TCTN2Q96GX1 697 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 PKP4Q99569 1192 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 PTGES2Q9H7Z7 377 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 SFXN1Q9H9B4 322 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TPT1P8Q9HAU6 139 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 POPDC3Q9HBV1 291 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 WWOXQ9NZC7 414 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM184BQ9Y519 407 aaPredicted RBP8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OR14I1A6ND48 311 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 A8MWP6 167 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 F5H5P2 479 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 H7C1Q1 480 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 EREGO14944 169 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 PCDH7O60245 1069 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 CXCL8P10145 99 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 SLC2A1P11166 492 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 XPAP23025 273 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 STAT5AP42229 794 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 HMGA2P52926 109 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 SGCGQ13326 291 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ANXA8L1Q5VT79 327 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 KIAA1161Q6NSJ0 714 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 JMJD6Q6NYC1 403 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 VITQ6UXI7 678 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF621Q6ZSS3 439 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 C6orf120Q7Z4R8 191 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 CDK20Q8IZL9 346 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF485Q8NCK3 441 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 OR51S1Q8NGJ8 323 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 HAVCR2Q8TDQ0 301 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 R3HDM4Q96D70 268 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 HPDLQ96IR7 371 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 AUNIPQ9H7T9 357 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 MEPEQ9NQ76 525 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 TDP1Q9NUW8 608 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 KLHL9Q9P2J3 617 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 RHCGQ9UBD6 479 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 RCE1Q9Y256 329 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 CENPFP49454 3210 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 SIP14410 1827 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 LRRN3E7EW58 273 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 MKRN2OSH3BPM6 223 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 DLEU1O43261 78 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 EMC8O43402 210 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 MOSPD3O75425 235 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 GJB1P08034 283 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 UCHL1P09936 223 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 LIMS3P0CW19 117 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 LIMS4P0CW20 117 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 PPM1AP35813 382 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 GEMP55040 296 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 WNT3P56703 355 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms