RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 THSD1Q9NS62 852 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SLC7A7Q9UM01 511 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ADAM23O75077 832 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 DHRS4L1P0CG22 281 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 AQP2P41181 271 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SNRPD2P62316 118 aaKnown RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 LACC1Q8IV20 430 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 GATSQ8NAP1 163 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 TAAR8Q969N4 342 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 DNAJA3Q96EY1 480 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF705GA8MUZ8 300 aaPredicted RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 OLFM2O95897 454 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ECI1P42126 302 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF136P52737 540 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CTXN1P60606 82 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 GAREM2Q75VX8 874 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 GLB1L2Q8IW92 636 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZFP41Q8N8Y5 198 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SIMC1Q8NDZ2 872 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 FCRL1Q96LA6 429 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CACNG4Q9UBN1 327 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF407Q9C0G0 2248 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 DOCK2Q92608 1830 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 TXNL1O43396 289 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 PPP3CBP16298 524 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 RPL22L1Q6P5R6 122 aaKnown RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 GRASPQ7Z6J2 395 aaPredicted RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CNTN4Q8IWV2 1026 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 NETO1Q8TDF5 533 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 TMEM212A6NML5 194 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF705FA8MVS1 300 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 DVL2O14641 736 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HLA-AP01891 365 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF705DP0CH99 300 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF705BP0CI00 300 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HNRNPKP61978 463 aaKnown RBP eCLIP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FIBINQ8TAL6 211 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 C3orf49Q96BT1 292 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MRPL22Q9NWU5 206 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FEZF1A0PJY2 475 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ACP2P11117 423 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ITGB7P26010 798 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 IL13RA1P78552 427 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF585AQ6P3V2 769 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RTL10Q7L3V2 364 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 SKA3Q8IX90 412 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 IL17RDQ8NFM7 739 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF300Q96RE9 604 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 NICN1Q9BSH3 213 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TMX2-CTNND1H3BSU7 103 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PRICKLE3O43900 615 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TK1P04183 234 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ALDOBP05062 364 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PTBP1P26599 531 aaKnown RBP eCLIP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TMEM244Q5VVB8 128 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 C5orf46Q6UWT4 87 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM217AQ8IXS0 508 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ARHGAP39Q9C0H5 1083 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MEIOCA2RUB1 952 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 IGLON5A6NGN9 336 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HBE1P02100 147 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 EPHA1P21709 976 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 CPOXP36551 454 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PI4KAP42356 2102 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HBG1P69891 147 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HBG2P69892 147 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LTB4RQ15722 352 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MRPL21Q7Z2W9 205 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 OR9A2Q8NGT5 310 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LILRB4Q8NHJ6 448 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RSC1A1Q92681 617 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZBED3Q96IU2 234 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM212BQ9NTI7 297 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 SAGE1Q9NXZ1 904 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 AKAP11Q9UKA4 1901 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 A6NHS1 94 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 GPRIN2O60269 458 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 GALEQ14376 348 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 OR52B6Q8NGF0 335 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ISG20Q96AZ6 181 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 INPP5KQ9BT40 448 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 BCAS3Q9H6U6 928 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ACTR10Q9NZ32 417 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RBPJLQ9UBG7 517 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MTCL1Q9Y4B5 1905 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FOXD2O60548 495 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MED6O75586 246 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 KIR2DS3Q14952 304 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PLGLAQ15195 96 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LRRC56Q8IYG6 542 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LMF1Q96S06 567 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 CERS4Q9HA82 394 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 KCNK12Q9HB15 430 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MARCH4Q9P2E8 410 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 POU2F3Q9UKI9 436 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms