RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GRK5P34947 590 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 ENTPD1P49961 510 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 LIMK1P53667 647 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 MED22Q15528 200 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 NDUFAF6Q330K2 333 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 RHBDD2Q6NTF9 364 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 C19orf48Q6RUI8 117 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 COX15Q7KZN9 410 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 ANKK1Q8NFD2 765 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 OR4D9Q8NGE8 314 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 RNF217Q8TC41 542 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 DYNC2LI1Q8TCX1 351 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 EFHD2Q96C19 240 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 BPIFA2Q96DR5 249 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 MGLLQ99685 303 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 VN1R1Q9GZP7 353 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 OR52D1Q9H346 318 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 UBQLN3Q9H347 655 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 GAREM1Q9H706 876 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 IL20RAQ9UHF4 553 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 DIMT1Q9UNQ2 313 aaKnown RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 SRPK3Q9UPE1 567 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CFL2Q9Y281 166 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 FER1L5A0AVI2 2057 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 COL5A1P20908 1838 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-201ENST00000269318 SPEGQ15772 3267 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 FRG2CA6NGY1 282 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 EFCAB9A8MZ26 197 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 AIREO43918 545 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 IL33O95760 270 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 CH25HO95992 272 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 CSTAP01040 98 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 CFIP05156 583 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 RPLP0P05388 317 aaKnown RBP15.3■□□□□ 0.04
CCDC40-201ENST00000269318 RBM34P42696 430 aaKnown RBP15.3■□□□□ 0.04
CCDC40-201ENST00000269318 DCTN2Q13561 401 aaKnown RBP15.3■□□□□ 0.04
CCDC40-201ENST00000269318 NSDHLQ15738 373 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 ALG10BQ5I7T1 473 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 FNDC7Q5VTL7 733 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 AADACL4Q5VUY2 407 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 KIRREL2Q6UWL6 708 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 FAM71CQ8NEG0 241 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 FANK1Q8TC84 345 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 OIT3Q8WWZ8 545 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 ZC3H10Q96K80 434 aaKnown RBP15.3■□□□□ 0.04
CCDC40-201ENST00000269318 NUDT9Q9BW91 350 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 TAPBPLQ9BX59 468 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 CTSFQ9UBX1 484 aa15.3■□□□□ 0.04
CCDC40-201ENST00000269318 IGHV5-10-1A0A0J9YXX1 117 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 EFCAB7A8K855 629 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 CSO75390 466 aaKnown RBP15.29■□□□□ 0.04
CCDC40-201ENST00000269318 NGFRP08138 427 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 TGFBR1P36897 503 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ACY1Q03154 408 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 SLC34A3Q8N130 599 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 CYP4Z2PQ8N1L4 340 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 NANOGP1Q8N7R0 232 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 OR14A16Q8NHC5 309 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 LCORQ96JN0 433 aaPredicted RBP15.29■□□□□ 0.04
CCDC40-201ENST00000269318 TEX12Q9BXU0 123 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ENKD1Q9H0I2 346 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ERGIC3Q9Y282 383 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 SIGLEC7Q9Y286 467 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 M0R3G1 203 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 BHLHE40O14503 412 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 RAB36O95755 333 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 HMGN1P05114 100 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 HSMCR30P0CW71 290 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 CKMT1AP12532 417 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ADH7P40394 386 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 RAB40BQ12829 278 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 MOGQ16653 247 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 KLHL22Q53GT1 634 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ULK3Q6PHR2 472 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 RABEPKQ7Z6M1 372 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ZBTB46Q86UZ6 589 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 ATCAYQ86WG3 371 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 PRSS58Q8IYP2 241 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 CDK20Q8IZL9 346 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 EID2Q8N6I1 236 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 SLC38A9Q8NBW4 561 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 PLPP5Q8NEB5 264 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 PROKR2Q8NFJ6 384 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 OR13C2Q8NGS9 318 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
CCDC40-201ENST00000269318 RNFT2Q96EX2 444 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 OPALINQ96PE5 141 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 MND1Q9BWT6 205 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 TGIF2Q9GZN2 237 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 HOXD1Q9GZZ0 328 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 LRRN3Q9H3W5 708 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 FGF20Q9NP95 211 aaPredicted RBP15.29■□□□□ 0.04
CCDC40-201ENST00000269318 UBQLN4Q9NRR5 601 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 MKL2Q9ULH7 1088 aa15.29■□□□□ 0.04
CCDC40-201ENST00000269318 PCDHGA3Q9Y5H0 932 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms