RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMEM202A6NGA9 273 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 GFYI3L273 518 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 OPN1SWP03999 348 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 NCK1P16333 377 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 ATP1B3P54709 279 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 LIM2P55344 173 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 C1orf94Q6P1W5 598 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 SLC16A14Q7RTX9 510 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF566Q969W8 418 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 TRIM8Q9BZR9 551 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 ING4Q9UNL4 249 aa12.52□□□□□ -0.4
PRPF38A-201ENST00000257181 FZD6O60353 706 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 CH25HO95992 272 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 NNATQ16517 81 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 TRAF7Q6Q0C0 670 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 P2RY8Q86VZ1 359 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 TP53INP1Q96A56 240 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 DHRS1Q96LJ7 313 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 SDR39U1Q9NRG7 319 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 PRELID3BQ9Y3B1 194 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 POM121BA6NF01 834 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 FRG2CA6NGY1 282 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC19A2O60779 497 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 LCATP04180 440 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF534Q76KX8 674 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 UBE2Q1Q7Z7E8 422 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 HS3ST5Q8IZT8 346 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 ACOT11Q8WXI4 607 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 MRGPRX4Q96LA9 322 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 MED17Q9NVC6 651 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 ICKQ9UPZ9 632 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 RPH3AQ9Y2J0 694 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 L7N2F9 121 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 SUSD5O60279 629 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 LCKP06239 509 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 FUT1P19526 365 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 VAMP2P63027 116 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 LEG1Q6P5S2 330 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 DHRS13Q6UX07 377 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 AHSA2Q719I0 299 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 UXS1Q8NBZ7 420 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 GSTO2Q9H4Y5 243 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 ZFP57Q9NU63 452 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
PRPF38A-201ENST00000257181 LRRTM2O43300 516 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 LAMP1P11279 417 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 CD22P20273 847 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 S100A16Q96FQ6 103 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 SGPP1Q9BX95 441 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 LAT2Q9GZY6 243 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF639Q9UID6 485 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 DNAJC15Q9Y5T4 150 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TMEM8BA6NDV4 472 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 LDB3O75112 727 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 GGT1P19440 569 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TUBA1BP68363 451 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TUBA4AP68366 448 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 RSU1Q15404 277 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TUBA1AQ71U36 451 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 OR13C3Q8NGS6 347 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 CDS1Q92903 461 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 AURKAO14965 403 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 SSNA1O43805 119 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 POU2F1P14859 743 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 SDC1P18827 310 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 RNPS1Q15287 305 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 LAS2Q8IYD9 372 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 TMBIM1Q969X1 311 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 NSUN5Q96P11 429 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 B3GNT4Q9C0J1 378 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF99A8MXY4 864 aaPredicted RBP12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 BMXP51813 675 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 PFN3P60673 137 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 SELENOWP63302 87 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 AGERQ15109 404 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 SLC23A3Q6PIS1 610 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 FAM131AQ6UXB0 335 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 FAM46BQ96A09 425 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 VDAC3Q9Y277 283 aa12.51□□□□□ -0.41
PRPF38A-201ENST00000257181 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 J3QLW9 94 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 ZNF19P17023 458 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 NPR2P20594 1047 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 GSTT1P30711 240 aa12.5□□□□□ -0.41
PRPF38A-201ENST00000257181 HOXA6P31267 233 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms