RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CSNK1G2P78368 415 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ETFDHQ16134 617 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 FNDC3BQ53EP0 1204 aaKnown RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PIP5KL1Q5T9C9 394 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC27A4Q6P1M0 643 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TMEM107Q6UX40 140 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 CD300LDQ6UXZ3 194 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 HSDL2Q6YN16 418 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 IZUMO1Q8IYV9 350 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR5K2Q8NHB8 316 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 UFD1Q92890 307 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 CNRIP1Q96F85 164 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 LRRC46Q96FV0 321 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PRRC1Q96M27 445 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 GPR137Q96N19 417 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 BBS4Q96RK4 519 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TMEM43Q9BTV4 400 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ACTR6Q9GZN1 396 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 DPP7Q9UHL4 492 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TBX21Q9UL17 535 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ATG4BQ9Y4P1 393 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 MDC1Q14676 2089 aaKnown RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 MYO15AQ9UKN7 3530 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 FAM170BA6NMN3 283 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 SEC14L5O43304 696 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PRNPP04156 253 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 GNSP15586 552 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TAS2R41P59536 307 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PPP3R1P63098 170 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 REEP5Q00765 189 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC25A30Q5SVS4 291 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 FAM46CQ5VWP2 391 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 C18orf63Q68DL7 685 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 HAGHLQ6PII5 290 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 NKAIN4Q8IVV8 208 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF485Q8NCK3 441 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 CLRN3Q8NCR9 226 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR4Q3Q8NH05 313 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 SUN3Q8TAQ9 357 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 TEX47Q8TBZ9 253 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 GIMAP1Q8WWP7 306 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 MS4A3Q96HJ5 214 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PAWRQ96IZ0 340 aaKnown RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF514Q96K75 400 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 THAP7Q9BT49 309 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 CRB3Q9BUF7 120 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 RNF208Q9H0X6 261 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 DPAGT1Q9H3H5 408 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 PPP1R3EQ9H7J1 279 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 FGF20Q9NP95 211 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 NIT2Q9NQR4 276 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 ACSS1Q9NUB1 689 aaPredicted RBP8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 EMC3Q9P0I2 261 aa8.76□□□□□ -1.01
HLA-DOA-201ENST00000229829 A0A0A6YYD5 115 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 TMEM129A0AVI4 362 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 LRIT2A6NDA9 550 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 FAM183AA6NL82 134 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 HRO43593 1189 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 TRIM3O75382 744 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 ERGP11308 486 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 CEBPBP17676 345 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZP3P21754 424 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 PPM1AP35813 382 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 CENPAP49450 140 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 FGL1Q08830 312 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 RAB40BQ12829 278 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 ZNF155Q12901 538 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 PAN3Q58A45 887 aaKnown RBP8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC25A25Q6KCM7 469 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC36A4Q6YBV0 504 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SPRED2Q7Z698 418 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 PAQR7Q86WK9 346 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 TOMM5Q8N4H5 51 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 PTP4A1Q93096 173 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 GINS4Q9BRT9 223 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 MARVELD1Q9BSK0 173 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 C6orf106Q9H6K1 298 aaPredicted RBP8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 DDX31Q9H8H2 851 aaKnown RBP8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC39A1Q9NY26 324 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 MARK1Q9P0L2 795 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 FLVCR2Q9UPI3 526 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 OR10H1Q9Y4A9 318 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SPEGQ15772 3267 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 ABHD14A-ACY1A0A1B0GW23 586 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 A0A1W2PR48 441 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 MAN2B1O00754 1011 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 FCMRO60667 390 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 UBXN7O94888 489 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 ADH5P11766 374 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 EPCAMP16422 314 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 MAOBP27338 520 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 TRIM23P36406 574 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC1A3P43003 542 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 GPR4P46093 362 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 SLC16A1P53985 500 aa8.75□□□□□ -1.01
HLA-DOA-201ENST00000229829 TAS2R38P59533 333 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms