RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 POLR2AP24928 1970 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM150CB9EJG8 249 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 H7C1C5 153 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SIX6O95475 246 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 LCN6P62502 163 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 FABP5Q01469 135 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 TSPAN31Q12999 210 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 C8orf82Q6P1X6 216 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 FIGLAQ6QHK4 219 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 OR2L2Q8NH16 312 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 PINK1Q9BXM7 581 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 FN3KQ9H479 309 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 TMPRSS11EQ9UL52 423 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 LAMB2P55268 1798 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 FZD6O60353 706 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CYB5AP00167 134 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CTSAP10619 480 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 MAOBP27338 520 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF33BQ06732 778 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 PXDC1Q5TGL8 231 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 LCTLQ6UWM7 567 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 APOOLQ6UXV4 268 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 DPPA4Q7L190 304 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CALHM3Q86XJ0 350 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CSNK1A1LQ8N752 337 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 OR13C5Q8NGS8 318 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 AMDHD1Q96NU7 426 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 A8MVJ9 347 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 DSCR3O14972 297 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 F13BP05160 661 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ART1P52961 327 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 FGL2Q14314 439 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ITPRIPL2Q3MIP1 535 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM35AQ53FP2 167 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 BEST3Q8N1M1 668 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 NEURL3Q96EH8 262 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 RXFP3Q9NSD7 469 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 NEU3Q9UQ49 428 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 SGK494L7N484 410 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ZDHHC11BP0C7U3 371 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 WNT3P56703 355 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 SMCO1Q147U7 214 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 GPAT4Q86UL3 456 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ARL14Q8N4G2 192 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 CCDC107Q8WV48 283 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 ARRDC3Q96B67 414 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 DIMT1Q9UNQ2 313 aaKnown RBP12.85□□□□□ -0.35
NFKB1-201ENST00000226574 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
NFKB1-201ENST00000226574 SCN3AQ9NY46 2000 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 FOXE1O00358 373 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 RDH16O75452 317 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 OR8G3PP0DMU2 310 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ELK1P19419 428 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 MAKP20794 623 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 NDUFS1P28331 727 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 PDX1P52945 283 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 OR10A3P58181 314 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 DECR1Q16698 335 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CDNFQ49AH0 187 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 NUP54Q7Z3B4 507 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 SIAH3Q8IW03 269 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 FAM46BQ96A09 425 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 MS4A8Q9BY19 250 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF350Q9GZX5 532 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM38AQ9H6F2 299 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 COPS3Q9UNS2 423 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 EP400Q96L91 3159 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CDC14CA4D256 554 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 GOSR2O14653 212 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 SLC22A5O76082 557 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 OPN1LWP04000 364 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 AMY2AP04746 511 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 AKR1C4P17516 323 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 AQP2P41181 271 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 VEGFCP49767 419 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ERVFC1P60507 584 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms