RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TIGD3Q6B0B8 471 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF550Q7Z398 422 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 GALNTL5Q7Z4T8 443 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 PLCZ1Q86YW0 608 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 EXD3Q8N9H8 876 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 WDSUB1Q8N9V3 476 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 OR1J4Q8NGS1 313 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 B4GALNT2Q8NHY0 566 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CNOT9Q92600 299 aaKnown RBP11.24□□□□□ -0.61
LINC00339-213ENST00000642137 PROX1Q92786 737 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 UGT2B28Q9BY64 529 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 HES7Q9BYE0 225 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 KLHL1Q9NR64 748 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 RLIMQ9NVW2 624 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 DNAJB12Q9NXW2 375 aaKnown RBP11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CARD8Q9Y2G2 431 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 CSAG2Q9Y5P2 127 aa11.24□□□□□ -0.61
LINC00339-213ENST00000642137 GNB5O14775 395 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF682O95780 498 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 MASP1P48740 699 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 SUMO3P55854 103 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF117Q03924 483 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 FOXO1Q12778 655 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 SKP2Q13309 424 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 NRF1Q16656 503 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 HYAL4Q2M3T9 481 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 PLEKHN1Q494U1 663 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 CBLN3Q6UW01 205 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 FKBP9P1Q75LS8 142 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 FADS6Q8N9I5 356 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 FAM98AQ8NCA5 519 aaKnown RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ARSGQ96EG1 525 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 SLC25A18Q9H1K4 315 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 DSN1Q9H410 356 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 PTGES2Q9H7Z7 377 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ZFP64Q9NPA5 681 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF71Q9NQZ8 489 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 TUBA8Q9NY65 449 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 MED11Q9P086 117 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 ICAM5Q9UMF0 924 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 B3GNT3Q9Y2A9 372 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 SLC9A8Q9Y2E8 581 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
LINC00339-213ENST00000642137 HEATR5AQ86XA9 2040 aa11.23□□□□□ -0.61
LINC00339-213ENST00000642137 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 DMXL2Q8TDJ6 3036 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 TCRBV3S1A0A5B6 114 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 ANKUB1A6NFN9 424 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 G3V3Y1 287 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 FAAHO00519 579 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 HCRTR2O43614 444 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 BCAS1O75363 584 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 CYP7B1O75881 506 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 HOXB6P17509 224 aaKnown RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 SLC6A8P48029 635 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 MEOX1P50221 254 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 GPR85P60893 370 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 ACTR3P61158 418 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 PLAURQ03405 335 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 KCNC4Q03721 635 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 EPS8Q12929 822 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 CBFBQ13951 182 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 INPP5JQ15735 1006 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 OR5M10Q6IEU7 315 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 VTCN1Q7Z7D3 282 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 COMTD1Q86VU5 262 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 SPATA24Q86W54 205 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 ZFP62Q8NB50 900 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 OR2M3Q8NG83 312 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 OR10Q1Q8NGQ4 319 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 OR5W2Q8NH69 310 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 DTNBP1Q96EV8 351 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF597Q96LX8 424 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 JSRP1Q96MG2 331 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-213ENST00000642137 GNRHR2Q96P88 292 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 MAGIXQ9H6Y5 334 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 SH3GLB1Q9Y371 365 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
LINC00339-213ENST00000642137 A0A0G2JMM0 328 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 A0A1W2PPB8 328 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 A0A1W2PRS3 328 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 KIR3DP1A8MWS1 328 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 OIP5O43482 229 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms