RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 HPCAL1P37235 193 aa15.06■□□□□ 0
SMN2-216ENST00000638794 ZNF117Q03924 483 aa15.06■□□□□ 0
SMN2-216ENST00000638794 ARL13AQ5H913 290 aaPredicted RBP15.06■□□□□ 0
SMN2-216ENST00000638794 LRIG3Q6UXM1 1119 aa15.06■□□□□ 0
SMN2-216ENST00000638794 BEND4Q6ZU67 534 aa15.06■□□□□ 0
SMN2-216ENST00000638794 TRABD2AQ86V40 505 aa15.06■□□□□ 0
SMN2-216ENST00000638794 LILRA2Q8N149 483 aa15.06■□□□□ 0
SMN2-216ENST00000638794 OR7A2PQ8NGA2 310 aa15.06■□□□□ 0
SMN2-216ENST00000638794 APOPT1Q96IL0 206 aa15.06■□□□□ 0
SMN2-216ENST00000638794 KLHL15Q96M94 604 aa15.06■□□□□ 0
SMN2-216ENST00000638794 STACQ99469 402 aa15.06■□□□□ 0
SMN2-216ENST00000638794 MECRQ9BV79 373 aa15.06■□□□□ 0
SMN2-216ENST00000638794 ACTR6Q9GZN1 396 aa15.06■□□□□ 0
SMN2-216ENST00000638794 C12orf49Q9H741 205 aa15.06■□□□□ 0
SMN2-216ENST00000638794 TRAF6Q9Y4K3 522 aa15.06■□□□□ 0
SMN2-216ENST00000638794 SNX8Q9Y5X2 465 aa15.06■□□□□ 0
SMN2-216ENST00000638794 CSPG4Q6UVK1 2322 aa15.06■□□□□ 0
SMN2-216ENST00000638794 NPIPA5A0A0B4J1W7 369 aa15.05■□□□□ -0
SMN2-216ENST00000638794 TMEM114B3SHH9 223 aa15.05■□□□□ -0
SMN2-216ENST00000638794 NPIPA7E9PJI5 369 aa15.05■□□□□ -0
SMN2-216ENST00000638794 SMAD7O15105 426 aaKnown RBP15.05■□□□□ -0
SMN2-216ENST00000638794 OIP5O43482 229 aa15.05■□□□□ -0
SMN2-216ENST00000638794 NPHS1O60500 1241 aa15.05■□□□□ -0
SMN2-216ENST00000638794 TUBBP07437 444 aa15.05■□□□□ -0
SMN2-216ENST00000638794 NPIPA8P0DM63 369 aa15.05■□□□□ -0
SMN2-216ENST00000638794 LAMP1P11279 417 aa15.05■□□□□ -0
SMN2-216ENST00000638794 DDX5P17844 614 aaKnown RBP15.05■□□□□ -0
SMN2-216ENST00000638794 SFTPDP35247 375 aa15.05■□□□□ -0
SMN2-216ENST00000638794 PTH2RP49190 550 aa15.05■□□□□ -0
SMN2-216ENST00000638794 RNF144AP50876 292 aaPredicted RBP15.05■□□□□ -0
SMN2-216ENST00000638794 FOXF1Q12946 379 aa15.05■□□□□ -0
SMN2-216ENST00000638794 PTGR1Q14914 329 aa15.05■□□□□ -0
SMN2-216ENST00000638794 PDSS1Q5T2R2 415 aa15.05■□□□□ -0
SMN2-216ENST00000638794 CBLN3Q6UW01 205 aa15.05■□□□□ -0
SMN2-216ENST00000638794 ZNF704Q6ZNC4 412 aaPredicted RBP15.05■□□□□ -0
SMN2-216ENST00000638794 PLEKHM3Q6ZWE6 761 aa15.05■□□□□ -0
SMN2-216ENST00000638794 STK32CQ86UX6 486 aa15.05■□□□□ -0
SMN2-216ENST00000638794 PHOSPHO1Q8TCT1 267 aa15.05■□□□□ -0
SMN2-216ENST00000638794 AGR3Q8TD06 166 aa15.05■□□□□ -0
SMN2-216ENST00000638794 IGFBPL1Q8WX77 278 aa15.05■□□□□ -0
SMN2-216ENST00000638794 ROBO4Q8WZ75 1007 aa15.05■□□□□ -0
SMN2-216ENST00000638794 OSTF1Q92882 214 aa15.05■□□□□ -0
SMN2-216ENST00000638794 BDH2Q9BUT1 245 aa15.05■□□□□ -0
SMN2-216ENST00000638794 GSX2Q9BZM3 304 aa15.05■□□□□ -0
SMN2-216ENST00000638794 PIGUQ9H490 435 aa15.05■□□□□ -0
SMN2-216ENST00000638794 FANCFQ9NPI8 374 aa15.05■□□□□ -0
SMN2-216ENST00000638794 MKS1Q9NXB0 559 aa15.05■□□□□ -0
SMN2-216ENST00000638794 GIN1Q9NXP7 522 aa15.05■□□□□ -0
SMN2-216ENST00000638794 TLDC2A0PJX2 215 aa15.04■□□□□ -0
SMN2-216ENST00000638794 PEX11AO75192 247 aa15.04■□□□□ -0
SMN2-216ENST00000638794 PLAUP00749 431 aa15.04■□□□□ -0
SMN2-216ENST00000638794 NID1P14543 1247 aa15.04■□□□□ -0
SMN2-216ENST00000638794 ELK4P28324 431 aa15.04■□□□□ -0
SMN2-216ENST00000638794 MAPK1P28482 360 aa15.04■□□□□ -0
SMN2-216ENST00000638794 EIF1P41567 113 aaKnown RBP15.04■□□□□ -0
SMN2-216ENST00000638794 CARD18P57730 90 aa15.04■□□□□ -0
SMN2-216ENST00000638794 TP53BP2Q13625 1128 aa15.04■□□□□ -0
SMN2-216ENST00000638794 ZNF239Q16600 458 aaKnown RBP15.04■□□□□ -0
SMN2-216ENST00000638794 XKR7Q5GH72 579 aa15.04■□□□□ -0
SMN2-216ENST00000638794 CDC73Q6P1J9 531 aa15.04■□□□□ -0
SMN2-216ENST00000638794 MTERF4Q7Z6M4 381 aaKnown RBP15.04■□□□□ -0
SMN2-216ENST00000638794 WFDC8Q8IUA0 241 aa15.04■□□□□ -0
SMN2-216ENST00000638794 BANPQ8N9N5 519 aa15.04■□□□□ -0
SMN2-216ENST00000638794 OR2W6PQ8NHA6 318 aa15.04■□□□□ -0
SMN2-216ENST00000638794 PSMA8Q8TAA3 256 aa15.04■□□□□ -0
SMN2-216ENST00000638794 RNF128Q8TEB7 428 aa15.04■□□□□ -0
SMN2-216ENST00000638794 ABHD3Q8WU67 409 aa15.04■□□□□ -0
SMN2-216ENST00000638794 NUDT8Q8WV74 236 aa15.04■□□□□ -0
SMN2-216ENST00000638794 PLPPR2Q96GM1 343 aa15.04■□□□□ -0
SMN2-216ENST00000638794 PPP3R2Q96LZ3 170 aa15.04■□□□□ -0
SMN2-216ENST00000638794 C1orf50Q9BV19 199 aa15.04■□□□□ -0
SMN2-216ENST00000638794 SRXN1Q9BYN0 137 aa15.04■□□□□ -0
SMN2-216ENST00000638794 CXorf36Q9H7Y0 433 aa15.04■□□□□ -0
SMN2-216ENST00000638794 EML4Q9HC35 981 aaKnown RBP15.04■□□□□ -0
SMN2-216ENST00000638794 SLC17A7Q9P2U7 560 aa15.04■□□□□ -0
SMN2-216ENST00000638794 EFNA2O43921 213 aa15.03■□□□□ -0
SMN2-216ENST00000638794 NUDT14O95848 222 aa15.03■□□□□ -0
SMN2-216ENST00000638794 PSMB1P20618 241 aaKnown RBP15.03■□□□□ -0
SMN2-216ENST00000638794 ATP6V1C1P21283 382 aa15.03■□□□□ -0
SMN2-216ENST00000638794 ARRB2P32121 409 aa15.03■□□□□ -0
SMN2-216ENST00000638794 RPL3P39023 403 aaKnown RBP15.03■□□□□ -0
SMN2-216ENST00000638794 CCT3P49368 545 aaKnown RBP15.03■□□□□ -0
SMN2-216ENST00000638794 NR1H2P55055 460 aa15.03■□□□□ -0
SMN2-216ENST00000638794 ZNF844Q08AG5 666 aa15.03■□□□□ -0
SMN2-216ENST00000638794 KLHL26Q53HC5 615 aa15.03■□□□□ -0
SMN2-216ENST00000638794 DCST2Q5T1A1 773 aa15.03■□□□□ -0
SMN2-216ENST00000638794 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.03■□□□□ -0
SMN2-216ENST00000638794 GTF2IRD2BQ6EKJ0 949 aa15.03■□□□□ -0
SMN2-216ENST00000638794 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
SMN2-216ENST00000638794 GTF2IRD2Q86UP8 949 aa15.03■□□□□ -0
SMN2-216ENST00000638794 HOMEZQ8IX15 550 aa15.03■□□□□ -0
SMN2-216ENST00000638794 ZNF527Q8NB42 609 aa15.03■□□□□ -0
SMN2-216ENST00000638794 OR56A1Q8NGH5 318 aa15.03■□□□□ -0
SMN2-216ENST00000638794 FBXO27Q8NI29 283 aa15.03■□□□□ -0
SMN2-216ENST00000638794 TMEM171Q8WVE6 324 aa15.03■□□□□ -0
SMN2-216ENST00000638794 OR5P2Q8WZ92 322 aa15.03■□□□□ -0
SMN2-216ENST00000638794 CPNE4Q96A23 557 aaPredicted RBP15.03■□□□□ -0
SMN2-216ENST00000638794 C3orf30Q96M34 536 aa15.03■□□□□ -0
SMN2-216ENST00000638794 ACTRT3Q9BYD9 372 aa15.03■□□□□ -0
SMN2-216ENST00000638794 OR10A4Q9H209 315 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms