RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 EMCNQ9ULC0 261 aa14.41□□□□□ -0.1
CD99-211ENST00000623253 A0A1W2PPM1 405 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 G3V2L1 256 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 PDPK1O15530 556 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 SEC22BO75396 215 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 KCNK2O95069 426 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 NUDT14O95848 222 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 FESP07332 822 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 NGFRP08138 427 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 ACP2P11117 423 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 ADH6P28332 368 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 SHC1P29353 583 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 PRIM2P49643 509 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 BSPH1Q075Z2 132 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 RNPS1Q15287 305 aaKnown RBP14.4□□□□□ -0.1
CD99-211ENST00000623253 ZNF239Q16600 458 aaKnown RBP14.4□□□□□ -0.1
CD99-211ENST00000623253 CCDC153Q494R4 210 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 ZNF672Q499Z4 452 aaPredicted RBP14.4□□□□□ -0.1
CD99-211ENST00000623253 TFAP2EQ6VUC0 442 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 ZAR1Q86SH2 424 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 TRABD2AQ86V40 505 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 HIPK1Q86Z02 1210 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 SLC16A11Q8NCK7 471 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 ATP6V1C2Q8NEY4 427 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 FAM76AQ8TAV0 307 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 RNF128Q8TEB7 428 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 PPCSQ9HAB8 311 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 UBQLN4Q9NRR5 601 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 KLHL13Q9P2N7 655 aa14.4□□□□□ -0.1
CD99-211ENST00000623253 GDF2Q9UK05 429 aaPredicted RBP14.4□□□□□ -0.1
CD99-211ENST00000623253 AKAP10O43572 662 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 RSL1D1O76021 490 aaKnown RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 PRKD3O94806 890 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 PROCP04070 461 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 ALOX5P09917 674 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 EIF1P41567 113 aaKnown RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 CCT5P48643 541 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 RNF144AP50876 292 aaPredicted RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 MANFP55145 182 aaKnown RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 DNAJB13P59910 316 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 FOXF1Q12946 379 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 STK11Q15831 433 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 DUSP5Q16690 384 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 CHRFAM7AQ494W8 412 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 CFAP157Q5JU67 520 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 CCNJQ5T5M9 372 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 FRMD7Q6ZUT3 714 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 TRIM46Q7Z4K8 759 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 MISPQ8IVT2 679 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 COX18Q8N8Q8 333 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 OR6Y1Q8NGX8 325 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 ZFP28Q8NHY6 868 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 UBLCP1Q8WVY7 318 aaPredicted RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 TMEM158Q8WZ71 300 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 JADE3Q92613 823 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 CPNE4Q96A23 557 aaPredicted RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 PPCDCQ96CD2 204 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 C16orf58Q96GQ5 468 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 MS4A4EQ96PG1 132 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 SRXN1Q9BYN0 137 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 CISD1Q9NZ45 108 aaKnown RBP14.39□□□□□ -0.11
CD99-211ENST00000623253 SH3BP4Q9P0V3 963 aa14.39□□□□□ -0.11
CD99-211ENST00000623253 DPRXA6NFQ7 191 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 A8MV72 311 aaPredicted RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 SSX4O60224 188 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 SHBGP04278 402 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 IFI6P09912 130 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 LINGO3P0C6S8 592 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 PTNP21246 168 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 CRHR1P34998 444 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 MAP3K8P41279 467 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 SERPINB4P48594 390 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 P2RY6Q15077 328 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 CD226Q15762 336 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 PGGHGQ32M88 737 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 TMEM176BQ3YBM2 270 aaPredicted RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 FCRLAQ7L513 359 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 BHLHA15Q7RTS1 189 aaPredicted RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 TDRPQ86YL5 185 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 OR2W6PQ8NHA6 318 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 FBXO27Q8NI29 283 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 PIWIL2Q8TC59 973 aaKnown RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 FAM110BQ8TC76 370 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 PHOSPHO1Q8TCT1 267 aa14.38□□□□□ -0.11
CD99-211ENST00000623253 HOXB13Q92826 284 aaPredicted RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 BARX1Q9HBU1 254 aaPredicted RBP14.38□□□□□ -0.11
CD99-211ENST00000623253 SONP18583 2426 aaKnown RBP14.37□□□□□ -0.11
CD99-211ENST00000623253 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 IGHV3-15A0A0B4J1V0 119 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 GJE1A6NN92 205 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 ZNF195O14628 629 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 EFNA2O43921 213 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 GPRIN2O60269 458 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 PLIN3O60664 434 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 RAMP1O60894 148 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 YES1P07947 543 aa14.37□□□□□ -0.11
CD99-211ENST00000623253 EFNA1P20827 205 aaPredicted RBP14.37□□□□□ -0.11
CD99-211ENST00000623253 C21orf58P58505 322 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms