RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SIRPB2Q5JXA9 342 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 NKAIN2Q5VXU1 208 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 C5orf24Q7Z6I8 188 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CLEC14AQ86T13 490 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 SCN4BQ8IWT1 228 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 FBXO22Q8NEZ5 403 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 OR8U1Q8NH10 309 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CYP2W1Q8TAV3 490 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 M1APQ8TC57 530 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM40Q8WWA1 233 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 MRPS31Q92665 395 aaKnown RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 TEX37Q96LM6 180 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 APOLD1Q96LR9 279 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CCDC115Q96NT0 180 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CNTNAP3BQ96NU0 1288 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 OR2A7Q96R45 310 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 NAA11Q9BSU3 229 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 BHLHE41Q9C0J9 482 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 OR10A5Q9H207 317 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 SMOC1Q9H4F8 434 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 CDCP1Q9H5V8 836 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 EXO5Q9H790 373 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 LPAR2Q9HBW0 351 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 HAO2Q9NYQ3 351 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 KCNG2Q9UJ96 466 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 ATF5Q9Y2D1 282 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF281Q9Y2X9 895 aa8.3□□□□□ -1.08
COMMD3-215ENST00000602574 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-215ENST00000602574 TCRBV7S3A2A0A539 114 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HYKKA2RU49 373 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 OR2M5A3KFT3 312 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MDM4O15151 490 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SOX15O60248 233 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MATN4O95460 622 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HIST1H2ABP04908 130 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 BMP3P12645 472 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MGMTP16455 207 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HRH2P25021 359 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SDC4P31431 198 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 PXNP49023 591 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 OAZ1P54368 228 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SHHQ15465 462 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 PSG3Q16557 428 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SOWAHAQ2M3V2 549 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 EML3Q32P44 896 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 PRAMEF14Q5SWL7 426 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SFRP5Q5T4F7 317 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HIST3H2AQ7L7L0 130 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HAS2Q92819 552 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HIST1H2ACQ93077 130 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 LRRC58Q96CX6 371 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SMARCD1Q96GM5 515 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 THAP7Q9BT49 309 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 NRSN2Q9GZP1 204 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 UBQLN3Q9H347 655 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 METTL17Q9H7H0 456 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MSL2Q9HCI7 577 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 B3GAT2Q9NPZ5 323 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MAN2C1Q9NTJ4 1040 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 PLEKHB1Q9UF11 243 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 OR14J1Q9UGF5 321 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 ST3GAL5Q9UNP4 418 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MRPS18BQ9Y676 258 aaKnown RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM269A0A1B0GVZ9 245 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 AGAP14A8MT82 685 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SERPINE3A8MV23 424 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 ALG1L2C9J202 215 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 FLRT2O43155 660 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MOSPD3O75425 235 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 CALCAP01258 141 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SFTPBP07988 381 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 IL6RP08887 468 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 SCGB1A1P11684 91 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF35P13682 527 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 RPA2P15927 270 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MPGP29372 298 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 BTCP35070 178 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 MAGEA3P43357 314 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 RABIFP47224 123 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 CEBPDP49716 269 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 DLX5P56178 289 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 CDC42P60953 191 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 OGDHQ02218 1023 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HNRNPA0Q13151 305 aaKnown RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 PWP1Q13610 501 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 DOCK1Q14185 1865 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 RAB35Q15286 201 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 HMGN3Q15651 99 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 ARL13AQ5H913 290 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-215ENST00000602574 TFDP3Q5H9I0 405 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 AKR1C8PQ5T2L2 129 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 NCR3LG1Q68D85 454 aa8.29□□□□□ -1.08
COMMD3-215ENST00000602574 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms