RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SLC13A4	Q9UKG4	626 aa		20.06	■□□□□ 0.8
LTBP4-227	ENST00000600026	BAG5	Q9UL15	447 aa		20.06	■□□□□ 0.8
LTBP4-227	ENST00000600026	ZNF443	Q9Y2A4	671 aa	Predicted RBP	20.06	■□□□□ 0.8
LTBP4-227	ENST00000600026		A0A1W2PQD3	144 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	AQP12B	A6NM10	295 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	TTLL8	A6PVC2	850 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026		B8ZZF3	427 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	FADS1	O60427	444 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	PRKAR1B	P31321	381 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	RFC3	P40938	356 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	DMTN	Q08495	405 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	MAPK14	Q16539	360 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	KLHL26	Q53HC5	615 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	EIPR1	Q53HC9	387 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	DHRS4L2	Q6PKH6	230 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	EIF3M	Q7L2H7	374 aa	Known RBP	20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	VRK2	Q86Y07	508 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	AQP12A	Q8IXF9	295 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	CMIP	Q8IY22	773 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	POGLUT1	Q8NBL1	392 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	NTNG2	Q96CW9	530 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	SNRNP40	Q96DI7	357 aa	Known RBP	20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	HHATL	Q9HCP6	504 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	GALNT9	Q9HCQ5	603 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	OLAH	Q9NV23	265 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	KLHL28	Q9NXS3	571 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	NCKAP5	O14513	1909 aa		20.05	■□□□□ 0.8
LTBP4-227	ENST00000600026	SERINC4	A6NH21	518 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	ALG1L2	C9J202	215 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	NID1	P14543	1247 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	KCNJ5	P48544	419 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	MLLT10	P55197	1068 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	SELENOW	P63302	87 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	FGFBP1	Q14512	234 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	INPP5J	Q15735	1006 aa	Predicted RBP	20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	SLC30A6	Q6NXT4	461 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	FAM180A	Q6UWF9	173 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	ZNF836	Q6ZNA1	936 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	SPATA24	Q86W54	205 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	SMYD1	Q8NB12	490 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	ZFP62	Q8NB50	900 aa	Predicted RBP	20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	PROX1	Q92786	737 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	TMEM41A	Q96HV5	264 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	TPD52L3	Q96J77	140 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	ZNF597	Q96LX8	424 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	SDHAF3	Q9NRP4	125 aa		20.04	■□□□□ 0.8
LTBP4-227	ENST00000600026	CENPVL1	A0A0U1RR11	272 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	GTPBP1	O00178	669 aa	Known RBP	20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	ADAM10	O14672	748 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	NDUFB5	O43674	189 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	SCO2	O43819	266 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	TRIM3	O75382	744 aa	Predicted RBP	20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	CD247	P20963	164 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	CRYBA2	P53672	197 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	KCNJ10	P78508	379 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	SNTA1	Q13424	505 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	RNF220	Q5VTB9	566 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	FKBP9P1	Q75LS8	142 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	MISP	Q8IVT2	679 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	C10orf67	Q8IYJ2	551 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	PHOSPHO1	Q8TCT1	267 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	TTTY12	Q9BZ98	90 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	EVA1A	Q9H8M9	152 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	BOK	Q9UMX3	212 aa	Predicted RBP	20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	SLC35A3	Q9Y2D2	325 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	WIF1	Q9Y5W5	379 aa		20.03	■□□□□ 0.8
LTBP4-227	ENST00000600026	SPTA1	P02549	2419 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	C2orf72	A6NCS6	295 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	LRRC3C	A6NJW4	275 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	SYT5	O00445	386 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	SNX4	O95219	450 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	ANGPTL1	O95841	491 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	CSTA	P01040	98 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	CRYAB	P02511	175 aa	Known RBP	20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	C8B	P07358	591 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	ZNF24	P17028	368 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	ADH7	P40394	386 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	GAS1	P54826	345 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	PLGLB1	Q02325	96 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	FOXO1	Q12778	655 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	RNFT1	Q5M7Z0	435 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	PRICKLE2	Q7Z3G6	844 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	MARCH3	Q86UD3	253 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	CPT1C	Q8TCG5	803 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	RSRC1	Q96IZ7	334 aa	Known RBP	20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	JSRP1	Q96MG2	331 aa	Predicted RBP	20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	UGT2B28	Q9BY64	529 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	ASF1B	Q9NVP2	202 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	HRH3	Q9Y5N1	445 aa		20.02	■□□□□ 0.8
LTBP4-227	ENST00000600026	TCRBV5S2	A0A599	114 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	SNPH	O15079	494 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	TPST1	O60507	370 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	PRKD3	O94806	890 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	GLS	O94925	669 aa	Predicted RBP	20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	FES	P07332	822 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	UMPS	P11172	480 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	UBL4A	P11441	157 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	MASP1	P48740	699 aa		20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	EEF1A1	P68104	462 aa	Known RBP	20.01	■□□□□ 0.79
LTBP4-227	ENST00000600026	KPNB1	Q14974	876 aa	Known RBP	20.01	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms