RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR4C6Q8NH72 309 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 TEX47Q8TBZ9 253 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 CLIP3Q96DZ5 547 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 OR1F2PQ96R84 312 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 PARD6AQ9NPB6 346 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 SERTAD3Q9UJW9 196 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 MMACHCQ9Y4U1 282 aa15.74■□□□□ 0.11
SHKBP1-216ENST00000598201 FMO6PO60774 539 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 MSL3P1P0C860 447 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 CDK4P11802 303 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 SMSP52788 366 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 OCLNQ16625 522 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 MED25Q71SY5 747 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 FAM26EQ8N5C1 309 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 OR2I1PQ8NGU4 316 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 PFN4Q8NHR9 129 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 FCGR1BQ92637 280 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 PELOQ9BRX2 385 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 DUSP23Q9BVJ7 150 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 ARMC7Q9H6L4 198 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF304Q9HCX3 659 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 DNAJB12Q9NXW2 375 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 FLRT3Q9NZU0 649 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 TESQ9UGI8 421 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF223Q9UK11 482 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 CBLCQ9ULV8 474 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 ADAMTS9Q9P2N4 1935 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 ADAMTS20P59510 1910 aa15.73■□□□□ 0.11
SHKBP1-216ENST00000598201 A0A1W2PQM1 296 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 DSCR3O14972 297 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 CER1O95813 267 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 FBLP22087 321 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TGM1P22735 817 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 STAT5AP42229 794 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 ACAA2P42765 397 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 LSM3P62310 102 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 DOC2BQ14184 412 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 NR0B2Q15466 257 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF141Q15928 474 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 SNAPC1Q16533 368 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 SYT14P1Q58G82 188 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 PLAG1Q6DJT9 500 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC27A4Q6P1M0 643 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TMEM71Q6P5X7 295 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 MRGPREQ86SM8 312 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 P2RY8Q86VZ1 359 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 OR4C3Q8NH37 302 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 Q96MT0 163 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 DPYSL5Q9BPU6 564 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 CDCA4Q9BXL8 241 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 POLR2J2Q9GZM3 115 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TIMMDC1Q9NPL8 285 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 OR10H1Q9Y4A9 318 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 ZFHX2Q9C0A1 2572 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 PIPP12273 146 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 CD36P16671 472 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 FUT1P19526 365 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC37A1P57057 533 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 RHAGQ02094 409 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF91Q05481 1191 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 DYNC1I2Q13409 638 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TIGD6Q17RP2 521 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 QSOX2Q6ZRP7 698 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 ZBTB46Q86UZ6 589 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 GRAMD2AQ8IUY3 354 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TMEM151BQ8IW70 566 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 PRSS58Q8IYP2 241 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 OR4Q3Q8NH05 313 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 RPL3LQ92901 407 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 LRR1Q96L50 414 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 TSSK6Q9BXA6 273 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 C20orf141Q9NUB4 165 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 IL20Q9NYY1 176 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 IL20RAQ9UHF4 553 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 GPR52Q9Y2T5 361 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 FER1L5A0AVI2 2057 aa15.72■□□□□ 0.11
SHKBP1-216ENST00000598201 A0A1B0GX78 115 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 DBTP11182 482 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 PNLIPP16233 465 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 MAKP20794 623 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 MLLT10P55197 1068 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 CCL7P80098 99 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 BIKQ13323 160 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 FGFBP1Q14512 234 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 NDUFAF6Q330K2 333 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC25A30Q5SVS4 291 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC30A6Q6NXT4 461 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF620Q6ZNG0 422 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 OR7G1Q8NGA0 311 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 GRHL3Q8TE85 626 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 TMEM239Q8WW34 195 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF582Q96NG8 517 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 OR5M11Q96RB7 305 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF559Q9BR84 538 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 G6PC3Q9BUM1 346 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 DPH1Q9BZG8 443 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 OR8D2Q9GZM6 311 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 ATP13A2Q9NQ11 1180 aa15.71■□□□□ 0.11
SHKBP1-216ENST00000598201 PRODH2Q9UF12 536 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms