RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 QRSL1Q9H0R6 528 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 TP63Q9H3D4 680 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 IKZF5Q9H5V7 419 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 MTHFD2LQ9H903 347 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 CACYBPQ9HB71 228 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 A4GALTQ9NPC4 353 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 PNPLA3Q9NST1 481 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ALKBH4Q9NXW9 302 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 SUCOQ9UBS9 1254 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ERRFI1Q9UJM3 462 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 VDAC3Q9Y277 283 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ARL2BPQ9Y2Y0 163 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 FIGNL2A6NMB9 653 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 OIP5O43482 229 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ZIC3O60481 467 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 EIF4E2O60573 245 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 CYP7B1O75881 506 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ACTL6AO96019 429 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ARAFP10398 606 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 COX4I1P13073 169 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 BMP7P18075 431 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 GPX2P18283 190 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 P2RX1P51575 399 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 CCR4P51679 360 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 MTPNP58546 118 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 MAPK11Q15759 364 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 NHSL2Q5HYW2 709 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 RPS26P11Q5JNZ5 115 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 AP1ARQ63HQ0 302 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 VASNQ6EMK4 673 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ZNF585AQ6P3V2 769 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 AAGABQ6PD74 315 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ENPP6Q6UWR7 440 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 C3P1Q6ZMU1 363 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 EIF3MQ7L2H7 374 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 PIGWQ7Z7B1 504 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 PEX5LQ8IYB4 626 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 WDR60Q8WVS4 1066 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 PMM1Q92871 262 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 MAL2Q969L2 176 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 ZG16BQ96DA0 208 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 CCT8L2Q96SF2 557 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 TRIM8Q9BZR9 551 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 GID8Q9NWU2 228 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 CAMK2AQ9UQM7 478 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 SLC35A3Q9Y2D2 325 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 L3MBTL1Q9Y468 752 aa17.83■□□□□ 0.44
SHKBP1-214ENST00000597396 A0A087WZY1 265 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 A0A0G2JPF8 293 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 HNRNPCL2B2RXH8 293 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 HNRNPCL3B7ZW38 293 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 HNRNPCL1O60812 293 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 NPPAP01160 153 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 DBIP07108 87 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 HNRNPCL4P0DMR1 293 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 IL7RP16871 459 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 ADH7P40394 386 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 SUMO3P55854 103 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 SELPLGQ14242 412 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 CYP51A1Q16850 503 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 GLYR1Q49A26 553 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 EMC4Q5J8M3 183 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 CBLN3Q6UW01 205 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 ARSKQ6UWY0 536 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 C10orf111Q8N326 155 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 NFKBIDQ8NI38 313 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 LRRC58Q96CX6 371 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 RCN3Q96D15 328 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 TIMP4Q99727 224 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 TREX2Q9BQ50 279 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 LAT2Q9GZY6 243 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 MYLK2Q9H1R3 596 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 ADAM21Q9UKJ8 722 aa17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 USP9YO00507 2555 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 USP9XQ93008 2570 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-214ENST00000597396 AGAP5A6NIR3 686 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 WDR1O75083 606 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 UBTFL6P0CB48 400 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 CHMP24386 653 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 GFRA1P56159 465 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 KCNJ10P78508 379 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 DCST1Q5T197 706 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 PRAMEF8Q5VWM4 474 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 PRAMEF7Q5VXH5 474 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 MTFR2Q6P444 385 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 TREML1Q86YW5 311 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 PM20D2Q8IYS1 436 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 METTL25Q8N6Q8 603 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 TOR1AIP2Q8NFQ8 470 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 OR5M1Q8NGP8 315 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 BBS10Q8TAM1 723 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 PSMG3-AS1Q96PY0 264 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 SH3GL1Q99961 368 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 PIGQQ9BRB3 760 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 SLC39A3Q9BRY0 314 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 MED17Q9NVC6 651 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 ICAM5Q9UMF0 924 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 MEMO1Q9Y316 297 aa17.81■□□□□ 0.44
SHKBP1-214ENST00000597396 NCOA6Q14686 2063 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms