RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 HIVEP2P31629 2446 aa14.03□□□□□ -0.16
PSMC4-204ENST00000596386 USF3Q68DE3 2245 aa14.02□□□□□ -0.16
PSMC4-204ENST00000596386 H7C1Q1 480 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 KLF4O43474 513 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 NPHS1O60500 1241 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 TUBBP07437 444 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 LINGO3P0C6S8 592 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 ELK4P28324 431 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 MAPK1P28482 360 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 AGTR1P30556 359 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 ALDH3A1P30838 453 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 RPL3P39023 403 aaKnown RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 EIF1P41567 113 aaKnown RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 NR1H2P55055 460 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 ZNF117Q03924 483 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 XKR7Q5GH72 579 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 ARL13AQ5H913 290 aaPredicted RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 MTERF4Q7Z6M4 381 aaKnown RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 STK32CQ86UX6 486 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 LILRA2Q8N149 483 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 CIARTQ8N365 385 aaPredicted RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 BANPQ8N9N5 519 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 PSMA8Q8TAA3 256 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 RNF128Q8TEB7 428 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 IGFBPL1Q8WX77 278 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 CDS1Q92903 461 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 CHMP6Q96FZ7 201 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 PPP3R2Q96LZ3 170 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 BDH2Q9BUT1 245 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 GSX2Q9BZM3 304 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 ACTR6Q9GZN1 396 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 OR10A4Q9H209 315 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 PIGUQ9H490 435 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 EML4Q9HC35 981 aaKnown RBP14.02□□□□□ -0.17
PSMC4-204ENST00000596386 DNHD1Q96M86 4753 aa14.02□□□□□ -0.17
PSMC4-204ENST00000596386 PABPC4LP0CB38 370 aaKnown RBP14.01□□□□□ -0.17
PSMC4-204ENST00000596386 LAMP1P11279 417 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 NID1P14543 1247 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 PSMB1P20618 241 aaKnown RBP14.01□□□□□ -0.17
PSMC4-204ENST00000596386 ATP6V1C1P21283 382 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 FOXF1Q12946 379 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 PTGR1Q14914 329 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 ZNF239Q16600 458 aaKnown RBP14.01□□□□□ -0.17
PSMC4-204ENST00000596386 GTF2IRD2BQ6EKJ0 949 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 CDC73Q6P1J9 531 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 ZNF704Q6ZNC4 412 aaPredicted RBP14.01□□□□□ -0.17
PSMC4-204ENST00000596386 PLEKHM3Q6ZWE6 761 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 GTF2IRD2Q86UP8 949 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 ZNF527Q8NB42 609 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 PHOSPHO1Q8TCT1 267 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■■■ 29
PSMC4-204ENST00000596386 OSTF1Q92882 214 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 MECRQ9BV79 373 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 GIMAP2Q9UG22 337 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 GPR52Q9Y2T5 361 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 SNX8Q9Y5X2 465 aa14.01□□□□□ -0.17
PSMC4-204ENST00000596386 PEX11AO75192 247 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 LY6G6DO95868 133 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ADH6P28332 368 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 SHC1P29353 583 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 SFTPDP35247 375 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 PTH2RP49190 550 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 CCT3P49368 545 aaKnown RBP14□□□□□ -0.17
PSMC4-204ENST00000596386 SUMO3P55854 103 aaPredicted RBP14□□□□□ -0.17
PSMC4-204ENST00000596386 CARD18P57730 90 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 TP53BP2Q13625 1128 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 KLHL26Q53HC5 615 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 DCST2Q5T1A1 773 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 CBLN3Q6UW01 205 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 RIBC1Q8N443 379 aaPredicted RBP14□□□□□ -0.17
PSMC4-204ENST00000596386 OR56A1Q8NGH5 318 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 AGR3Q8TD06 166 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ABHD3Q8WU67 409 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ROBO4Q8WZ75 1007 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 OR5P2Q8WZ92 322 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 CPNE4Q96A23 557 aaPredicted RBP14□□□□□ -0.17
PSMC4-204ENST00000596386 PLPPR2Q96GM1 343 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ACTRT3Q9BYD9 372 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 HOXD1Q9GZZ0 328 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 C12orf49Q9H741 205 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 CXorf36Q9H7Y0 433 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 TIGARQ9NQ88 270 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ATAD3AQ9NVI7 634 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 GPATCH2Q9NW75 528 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 SLC17A7Q9P2U7 560 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ICAM5Q9UMF0 924 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 ACTL7BQ9Y614 415 aa14□□□□□ -0.17
PSMC4-204ENST00000596386 NUP214P35658 2090 aaPredicted RBP14□□□□□ -0.17
PSMC4-204ENST00000596386 NPIPA5A0A0B4J1W7 369 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 TRIM64A6NGJ6 449 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 TRIM64BA6NI03 449 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 GJE1A6NN92 205 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 NPIPA7E9PJI5 369 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 H3BNH8 94 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 OIP5O43482 229 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 LYPLA1O75608 230 aaPredicted RBP13.99□□□□□ -0.17
PSMC4-204ENST00000596386 NUDT14O95848 222 aa13.99□□□□□ -0.17
PSMC4-204ENST00000596386 KRT16P08779 473 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms