RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 EIF1P41567 113 aaKnown RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 POU6F2P78424 691 aaPredicted RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 PCLAFQ15004 111 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 R3HCC1LQ7Z5L2 792 aaKnown RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 LILRA2Q8N149 483 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 ZNF611Q8N823 705 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 JADE3Q92613 823 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 PLPPR2Q96GM1 343 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 STACQ99469 402 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 CXorf56Q9H5V9 222 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 SIRT3Q9NTG7 399 aaPredicted RBP21.35■■□□□ 1.01
LSM4-202ENST00000593564 GIN1Q9NXP7 522 aa21.35■■□□□ 1.01
LSM4-202ENST00000593564 HS3ST1O14792 307 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 TRIM13O60858 407 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 PLAUP00749 431 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 PABPC4LP0CB38 370 aaKnown RBP21.34■■□□□ 1.01
LSM4-202ENST00000593564 BCKDHAP12694 445 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 NID1P14543 1247 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 EFNA1P20827 205 aaPredicted RBP21.34■■□□□ 1.01
LSM4-202ENST00000593564 CARD18P57730 90 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 GALNTL6Q49A17 601 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 LRIG3Q6UXM1 1119 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 MTERF4Q7Z6M4 381 aaKnown RBP21.34■■□□□ 1.01
LSM4-202ENST00000593564 WFDC8Q8IUA0 241 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 EIF1ADQ8N9N8 165 aaKnown RBP21.34■■□□□ 1.01
LSM4-202ENST00000593564 RNF128Q8TEB7 428 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 PIGUQ9H490 435 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 C12orf49Q9H741 205 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 ZCCHC3Q9NUD5 404 aaKnown RBP21.34■■□□□ 1.01
LSM4-202ENST00000593564 ATP6V1HQ9UI12 483 aa21.34■■□□□ 1.01
LSM4-202ENST00000593564 SMIM23A6NLE4 172 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 HMGN2P05204 90 aaKnown RBP21.33■■□□□ 1.01
LSM4-202ENST00000593564 PCSK6P29122 969 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 HPCAL1P37235 193 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 ZNF117Q03924 483 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 ZNF844Q08AG5 666 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 FOXF1Q12946 379 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 LASP1Q14847 261 aaKnown RBP21.33■■□□□ 1.01
LSM4-202ENST00000593564 ZNF239Q16600 458 aaKnown RBP21.33■■□□□ 1.01
LSM4-202ENST00000593564 C4orf33Q8N1A6 199 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 STEAP2Q8NFT2 490 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 UBLCP1Q8WVY7 318 aaPredicted RBP21.33■■□□□ 1.01
LSM4-202ENST00000593564 ROBO4Q8WZ75 1007 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 CDS1Q92903 461 aa21.33■■□□□ 1.01
LSM4-202ENST00000593564 CPNE4Q96A23 557 aaPredicted RBP21.33■■□□□ 1.01
LSM4-202ENST00000593564 PRR14LQ5THK1 2151 aa21.33■■□□□ 1
LSM4-202ENST00000593564 SCAMP2O15127 329 aaKnown RBP21.32■■□□□ 1
LSM4-202ENST00000593564 FGF4P08620 206 aa21.32■■□□□ 1
LSM4-202ENST00000593564 ADH6P28332 368 aa21.32■■□□□ 1
LSM4-202ENST00000593564 SHC1P29353 583 aa21.32■■□□□ 1
LSM4-202ENST00000593564 SFTPDP35247 375 aa21.32■■□□□ 1
LSM4-202ENST00000593564 SUMO3P55854 103 aaPredicted RBP21.32■■□□□ 1
LSM4-202ENST00000593564 RNPS1Q15287 305 aaKnown RBP21.32■■□□□ 1
LSM4-202ENST00000593564 UGT3A2Q3SY77 523 aa21.32■■□□□ 1
LSM4-202ENST00000593564 PRIMA1Q86XR5 153 aa21.32■■□□□ 1
LSM4-202ENST00000593564 DDIASQ8IXT1 998 aa21.32■■□□□ 1
LSM4-202ENST00000593564 GABRG1Q8N1C3 465 aa21.32■■□□□ 1
LSM4-202ENST00000593564 PHOSPHO1Q8TCT1 267 aa21.32■■□□□ 1
LSM4-202ENST00000593564 EPS8L3Q8TE67 593 aaKnown RBP21.32■■□□□ 1
LSM4-202ENST00000593564 ABHD3Q8WU67 409 aa21.32■■□□□ 1
LSM4-202ENST00000593564 TWIST2Q8WVJ9 160 aa21.32■■□□□ 1
LSM4-202ENST00000593564 CHMP6Q96FZ7 201 aa21.32■■□□□ 1
LSM4-202ENST00000593564 REXO5Q96IC2 774 aaKnown RBP21.32■■□□□ 1
LSM4-202ENST00000593564 HDHD5Q9BXW7 423 aa21.32■■□□□ 1
LSM4-202ENST00000593564 HOXD1Q9GZZ0 328 aa21.32■■□□□ 1
LSM4-202ENST00000593564 TIGARQ9NQ88 270 aa21.32■■□□□ 1
LSM4-202ENST00000593564 TMEM114B3SHH9 223 aa21.31■■□□□ 1
LSM4-202ENST00000593564 GCM2O75603 506 aaPredicted RBP21.31■■□□□ 1
LSM4-202ENST00000593564 CHRNGP07510 517 aa21.31■■□□□ 1
LSM4-202ENST00000593564 ATP6V1C1P21283 382 aa21.31■■□□□ 1
LSM4-202ENST00000593564 RPL3P39023 403 aaKnown RBP21.31■■□□□ 1
LSM4-202ENST00000593564 KLHL26Q53HC5 615 aa21.31■■□□□ 1
LSM4-202ENST00000593564 TMEM201Q5SNT2 666 aa21.31■■□□□ 1
LSM4-202ENST00000593564 CDC73Q6P1J9 531 aa21.31■■□□□ 1
LSM4-202ENST00000593564 TFAP2EQ6VUC0 442 aa21.31■■□□□ 1
LSM4-202ENST00000593564 ZNF527Q8NB42 609 aa21.31■■□□□ 1
LSM4-202ENST00000593564 OR7A2PQ8NGA2 310 aa21.31■■□□□ 1
LSM4-202ENST00000593564 PSMA8Q8TAA3 256 aa21.31■■□□□ 1
LSM4-202ENST00000593564 S100PBPQ96BU1 408 aa21.31■■□□□ 1
LSM4-202ENST00000593564 SRXN1Q9BYN0 137 aa21.31■■□□□ 1
LSM4-202ENST00000593564 GP6Q9HCN6 339 aa21.31■■□□□ 1
LSM4-202ENST00000593564 KLHL13Q9P2N7 655 aa21.31■■□□□ 1
LSM4-202ENST00000593564 ICAM5Q9UMF0 924 aa21.31■■□□□ 1
LSM4-202ENST00000593564 ACTL7BQ9Y614 415 aa21.31■■□□□ 1
LSM4-202ENST00000593564 GJE1A6NN92 205 aa21.3■■□□□ 1
LSM4-202ENST00000593564 TMEM233B4DJY2 109 aa21.3■■□□□ 1
LSM4-202ENST00000593564 PIP5K1BO14986 540 aa21.3■■□□□ 1
LSM4-202ENST00000593564 EFNA2O43921 213 aa21.3■■□□□ 1
LSM4-202ENST00000593564 MAPK1P28482 360 aa21.3■■□□□ 1
LSM4-202ENST00000593564 ATP5J2P56134 94 aa21.3■■□□□ 1
LSM4-202ENST00000593564 ADAM5Q6NVV9 412 aa21.3■■□□□ 1
LSM4-202ENST00000593564 CBLN3Q6UW01 205 aa21.3■■□□□ 1
LSM4-202ENST00000593564 FBXO27Q8NI29 283 aa21.3■■□□□ 1
LSM4-202ENST00000593564 AKAP1Q92667 903 aaKnown RBP eCLIP21.3■■□□□ 1
LSM4-202ENST00000593564 TACO1Q9BSH4 297 aaKnown RBP21.3■■□□□ 1
LSM4-202ENST00000593564 ACTRT3Q9BYD9 372 aa21.3■■□□□ 1
LSM4-202ENST00000593564 MKS1Q9NXB0 559 aa21.3■■□□□ 1
LSM4-202ENST00000593564 TRAF6Q9Y4K3 522 aa21.3■■□□□ 1
LSM4-202ENST00000593564 SNX8Q9Y5X2 465 aa21.3■■□□□ 1
LSM4-202ENST00000593564 GPC6Q9Y625 555 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms