RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PPIAP62937 165 aaKnown RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 EEF1A1P68104 462 aaKnown RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 PMP22Q01453 160 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ZNF117Q03924 483 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 ZSCAN26Q16670 478 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 FAM180AQ6UWF9 173 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ZNF836Q6ZNA1 936 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ZNF440Q8IYI8 595 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 WDSUB1Q8N9V3 476 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 Q8NA96 180 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 SMYD1Q8NB12 490 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 TOR1AIP2Q8NFQ8 470 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 RNF145Q96MT1 663 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 GNRHR2Q96P88 292 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 PCDHAC1Q9H158 963 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 MMADHCQ9H3L0 296 aaPredicted RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 DSN1Q9H410 356 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ADPRHL2Q9NX46 363 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 MED11Q9P086 117 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ANAPC2Q9UJX6 822 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 BAG5Q9UL15 447 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 C15orf41Q9Y2V0 281 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 BSNQ9UPA5 3926 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 IGLV3-32A0A0A0MS00 114 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 CDHR4A6H8M9 788 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 C17orf51A8MQB3 221 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 FAM47E-STBD1D6RA91 191 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 TFECO14948 347 aaPredicted RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 ARPC2O15144 300 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 GLSO94925 669 aaPredicted RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 NUDT14O95848 222 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 SERPINA1P01009 418 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ZNF24P17028 368 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 SLC6A8P48029 635 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 KCNJ5P48544 419 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 CCR4P51679 360 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 SUMO3P55854 103 aaPredicted RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 ALDH6A1Q02252 535 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 DMTNQ08495 405 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 SKP2Q13309 424 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 CBFBQ13951 182 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ELOAQ14241 798 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 TRIM25Q14258 630 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 TOMM20Q15388 145 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 FXNQ16595 210 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 HYAL4Q2M3T9 481 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 COLEC12Q5KU26 742 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ASRGL1Q7L266 308 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 GRAMD2AQ8IUY3 354 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ULK2Q8IYT8 1036 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 CLIP4Q8N3C7 705 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 FADS6Q8N9I5 356 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 LZICQ8WZA0 190 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 SLC39A7Q92504 469 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 CNOT9Q92600 299 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 PROX1Q92786 737 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 TAMM41Q96BW9 452 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ASB9Q96DX5 294 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 NSMCE2Q96MF7 247 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 GORASP2Q9H8Y8 452 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 RLIMQ9NVW2 624 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 DNAJB12Q9NXW2 375 aaKnown RBP12.41□□□□□ -0.42
VMP1-210ENST00000589823 ACTR3BQ9P1U1 418 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 RPS6KA6Q9UK32 745 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 DKKL1Q9UK85 242 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 FBXL2Q9UKC9 423 aa12.41□□□□□ -0.42
VMP1-210ENST00000589823 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 SYT5O00445 386 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 SUV39H1O43463 412 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 OIP5O43482 229 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 TPST1O60507 370 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 SORBS2O94875 1100 aaKnown RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 ZNF682O95780 498 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 C8BP07358 591 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 RFPL3SP0C7P2 107 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 UQCRBP14927 111 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 CD247P20963 164 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 ZNF41P51814 821 aaPredicted RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 DSCR4P56555 118 aaPredicted RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 SELENOWP63302 87 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 GANABQ14697 944 aaKnown RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 DUSP7Q16829 419 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 CYBRD1Q53TN4 286 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 DHFR2Q86XF0 187 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 EID3Q8N140 333 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 FAM109AQ8N4B1 249 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 CISD2Q8N5K1 135 aaKnown RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms