RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LEG1Q6P5S2 330 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 S100A13Q99584 98 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 NDRG4Q9ULP0 352 aaKnown RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 CMAHPQ9Y471 501 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 UPK1AO00322 258 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 PRODHO43272 600 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 IRAK1BP1Q5VVH5 260 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 TMEM184AQ6ZMB5 413 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 NLRP8Q86W28 1048 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 PLXDC1Q8IUK5 500 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 TANKQ92844 425 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 TMCO6Q96DC7 493 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 LAMP5Q9UJQ1 280 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 EXOSC1Q9Y3B2 195 aaKnown RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 FAM221BA6H8Z2 402 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 DOK2O60496 412 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 ADH7P40394 386 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 CXCR4P61073 352 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 ARL14Q8N4G2 192 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 LRRC17Q8N6Y2 441 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 LINC00615Q96LM1 132 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 B3GNT4Q9C0J1 378 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 ADAM29Q9UKF5 820 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 ARHGEF17Q96PE2 2063 aaPredicted RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 SOBPA7XYQ1 873 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 AQP9O43315 295 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 SEC14L2O76054 403 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 SOD1P00441 154 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 KLK3P07288 261 aaPredicted RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 DNASE1L1P49184 302 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 PPP5CP53041 499 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 CCDC92Q53HC0 331 aaPredicted RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 NLGN4YQ8NFZ3 816 aaPredicted RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 DAZLQ92904 295 aaKnown RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 C7orf34Q96L11 122 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 ALG8Q9BVK2 526 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 SP140LQ9H930 580 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 THSD1Q9NS62 852 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 PLCL2Q9UPR0 1127 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 MRPS2Q9Y399 296 aaKnown RBP13.58□□□□□ -0.23
RETREG3-208ENST00000589797 CORINQ9Y5Q5 1042 aa13.58□□□□□ -0.23
RETREG3-208ENST00000589797 FAM172BPA6NC97 362 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 EPOPA6NHQ4 379 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 PLRG1O43660 514 aaKnown RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 YPEL5P62699 121 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TRA2BP62995 288 aaKnown RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 C1orf94Q6P1W5 598 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 JAGN1Q8N5M9 183 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 C19orf47Q8N9M1 422 aaKnown RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 MMP17Q9ULZ9 603 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 STUB1Q9UNE7 303 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 BDP1A6H8Y1 2624 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 FUCA1P04066 466 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 BMP4P12644 408 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TRIM23P36406 574 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 ZFP36L2P47974 494 aaKnown RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TMEM44Q2T9K0 475 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 VWA2Q5GFL6 755 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 SAXO2Q658L1 398 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 ZNF517Q6ZMY9 492 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 KRT77Q7Z794 578 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 UBQLNLQ8IYU4 475 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TDHQ8IZJ6 230 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 KDM8Q8N371 416 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 Q8N402 240 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TP53I13Q8NBR0 393 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 PFN4Q8NHR9 129 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 BMFQ96LC9 184 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 RPH3AQ9Y2J0 694 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 FAM25EA8MYX2 175 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 K7EQS6 105 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 PRKCAP17252 672 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 TEAD1P28347 426 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 AQP6Q13520 282 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 ELF4Q99607 663 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-208ENST00000589797 FN3KQ9H479 309 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 UCKL1Q9NWZ5 548 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 PCDHGB6Q9Y5F9 930 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 FKBP7Q9Y680 259 aa13.58□□□□□ -0.24
RETREG3-208ENST00000589797 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
RETREG3-208ENST00000589797 PRAMEF2O60811 474 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 DHFRP00374 187 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 RORAP35398 523 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 GDF7Q7Z4P5 450 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 SIMC1Q8NDZ2 872 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 OR4K17Q8NGC6 315 aa13.57□□□□□ -0.24
RETREG3-208ENST00000589797 COMMD4Q9H0A8 199 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms