RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ZNF223Q9UK11 482 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 ADAM18Q9Y3Q7 739 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 FZD9O00144 591 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 TCTE3Q8IZS6 198 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 OR4F15Q8NGB8 312 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 OR4E2Q8NGC2 313 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 HOXB13Q92826 284 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 YIPF6Q96EC8 236 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 MSLNLQ96KJ4 702 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 C20orf85Q9H1P6 137 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 PELI2Q9HAT8 420 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 DZANK1Q9NVP4 752 aa13.77□□□□□ -0.21
SMARCA4-214ENST00000589677 A0A1B0GTW7 788 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TMEM82A0PJX8 343 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 E2F3O00716 465 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TLE3Q04726 772 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 AWAT2Q6E213 333 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 MFSD6LQ8IWD5 586 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TMEM239Q8WW34 195 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TMEM234Q8WY98 164 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 SFXN2Q96NB2 322 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 SLC38A3Q99624 504 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 AMBRA1Q9C0C7 1298 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 EFCAB7A8K855 629 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 GPR32O75388 356 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ARAFP10398 606 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 PDGFRLQ15198 375 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 KCTD11Q693B1 232 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ADGRF3Q8IZF5 1079 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ZBTB44Q8NCP5 570 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 HMGB4Q8WW32 186 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 RELTQ969Z4 430 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 CRB3Q9BUF7 120 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TCEAL2Q9H3H9 227 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ENY2Q9NPA8 101 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 SEMA4GQ9NTN9 838 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 NUMBLQ9Y6R0 609 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 RNF215Q9Y6U7 377 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 C8AP07357 584 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 GIPP09681 153 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 CLRN1P58418 232 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 SNRPGP62308 76 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ID2Q02363 134 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 GHRHRQ02643 423 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 LTBQ06643 244 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 BEX5Q5H9J7 111 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 C1QTNF12Q5T7M4 302 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 FCRLAQ7L513 359 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TM9SF4Q92544 642 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 GABARAPL1Q9H0R8 117 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 IL17CQ9P0M4 197 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 VEGFDO43915 354 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ADRA1AP35348 466 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TSPAN31Q12999 210 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TOR2AQ5JU69 321 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ZNF704Q6ZNC4 412 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 OR8J2Q8NGG1 315 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 LRIG1Q96JA1 1093 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 ALOXE3Q9BYJ1 711 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 TSPAN10Q9H1Z9 355 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 IGFLR1Q9H665 355 aa13.76□□□□□ -0.21
SMARCA4-214ENST00000589677 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 B4DXG7 233 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 D6RAR5 112 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 TNFRSF10BO14763 440 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 SCAMP1O15126 338 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 SERPINF1P36955 418 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 VEGFCP49767 419 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 TXNDC8Q6A555 127 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 CMTM8Q8IZV2 173 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 CYB5D2Q8WUJ1 264 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 KIF25Q9UIL4 384 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 CCR9P51686 369 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 ARHGAP40Q5TG30 622 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 C7orf61Q8IZ16 206 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 CYB561A3Q8NBI2 242 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 ZNF680Q8NEM1 530 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 FAM212BQ9NTI7 297 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 KNG1P01042 644 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 PPT1P50897 306 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 CAV2P51636 162 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 SOX4Q06945 474 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 IER5LQ5T953 404 aa13.75□□□□□ -0.21
SMARCA4-214ENST00000589677 FIP1L1Q6UN15 594 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms