RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	RNF220	Q5VTB9	566 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	ARHGAP11A	Q6P4F7	1023 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	TRIL	Q7L0X0	811 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	KRT73	Q86Y46	540 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	GRAMD2A	Q8IUY3	354 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	PGAM4	Q8N0Y7	254 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	GATS	Q8NAP1	163 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	FAM71C	Q8NEG0	241 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	OR52P1P	Q8NH57	321 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	SLC35B4	Q969S0	331 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	ARSG	Q96EG1	525 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	QRSL1	Q9H0R6	528 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	ARMC7	Q9H6L4	198 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	CACYBP	Q9HB71	228 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	SPAG4	Q9NPE6	437 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	EXOSC3	Q9NQT5	275 aa	Known RBP	11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	TMEM181	Q9P2C4	612 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	ICAM5	Q9UMF0	924 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	HRH3	Q9Y5N1	445 aa		11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	GPC6	Q9Y625	555 aa	Predicted RBP	11.21	□□□□□ -0.61
PKN1-208	ENST00000586900	GTF3C1	Q12789	2109 aa		11.21	□□□□□ -0.62
PKN1-208	ENST00000586900	HEATR5A	Q86XA9	2040 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	TRGV5	A0A0B4J1U4	118 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ANKUB1	A6NFN9	424 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	CCT8L1P	A6NM43	557 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	C17orf51	A8MQB3	221 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	NME4	O00746	187 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	AQP7	O14520	342 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	HCRTR2	O43614	444 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ZIC3	O60481	467 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	SERPINB7	O75635	380 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	TRAPPC6A	O75865	159 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	WISP2	O76076	250 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	CELA3A	P09093	270 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	PABPC4L	P0CB38	370 aa	Known RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	T-ENOL	P0DO92	83 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	EEFSEC	P57772	596 aa	Known RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	SKP2	Q13309	424 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	SPATS1	Q496A3	300 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	NHSL2	Q5HYW2	709 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ZNF311	Q5JNZ3	666 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	CBLN3	Q6UW01	205 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	C16orf89	Q6UX73	402 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	GFRAL	Q6UXV0	394 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	CCDC80	Q76M96	950 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	PATL1	Q86TB9	770 aa	Known RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ATCAY	Q86WG3	371 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	OR2T12	Q8NG77	320 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	OR5W2	Q8NH69	310 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	NEIL3	Q8TAT5	605 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	C1GALT1C1	Q96EU7	318 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	LDAH	Q9H6V9	325 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	EVA1A	Q9H8M9	152 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	CARD8	Q9Y2G2	431 aa		11.2	□□□□□ -0.62
PKN1-208	ENST00000586900	ELOVL7	A1L3X0	281 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	C7orf72	A4D263	438 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	CDHR4	A6H8M9	788 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	OR14I1	A6ND48	311 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	PRORSD1P	A6NEY8	169 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900		B2RBV5	119 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	LINC01387	J3KSC0	135 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ETV2	O00321	342 aa	Predicted RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	OIP5	O43482	229 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	GCM2	O75603	506 aa	Predicted RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	PRKAR1B	P31321	381 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	GCK	P35557	465 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	EEF1A1	P68104	462 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	LIPE	Q05469	1076 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	RBPJ	Q06330	500 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ELOA	Q14241	798 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	TOMM20	Q15388	145 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	EIPR1	Q53HC9	387 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	MRPL2	Q5T653	305 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	DHRS4L2	Q6PKH6	230 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	VRK2	Q86Y07	508 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	CHERP	Q8IWX8	916 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ZNF440	Q8IYI8	595 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	MICU2	Q8IYU8	434 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	GPR119	Q8TDV5	335 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ZBTB8A	Q96BR9	441 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	C1orf21	Q9H246	121 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ALG2	Q9H553	416 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	PIF1	Q9H611	641 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	DNAJB12	Q9NXW2	375 aa	Known RBP	11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	TAS2R10	Q9NYW0	307 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	DKKL1	Q9UK85	242 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	ZNF835	Q9Y2P0	537 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900	LIPG	Q9Y5X9	500 aa		11.19	□□□□□ -0.62
PKN1-208	ENST00000586900		A0A1B0GTH9	108 aa		11.18	□□□□□ -0.62
PKN1-208	ENST00000586900	CLDN24	A6NM45	220 aa		11.18	□□□□□ -0.62
PKN1-208	ENST00000586900	FAM47E-STBD1	D6RA91	191 aa		11.18	□□□□□ -0.62
PKN1-208	ENST00000586900		M0QX08	132 aa		11.18	□□□□□ -0.62
PKN1-208	ENST00000586900	FAAH	O00519	579 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms