RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	AGBL2	Q5U5Z8	902 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	HEPHL1	Q6MZM0	1159 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GALNT10	Q86SR1	603 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GGN	Q86UU5	652 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	TMEM200A	Q86VY9	491 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	UBQLNL	Q8IYU4	475 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CLECL1	Q8IZS7	167 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PHOSPHO1	Q8TCT1	267 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PMM1	Q92871	262 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NINJ1	Q92982	152 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ARSG	Q96EG1	525 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NEURL3	Q96EH8	262 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MAEL	Q96JY0	434 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SLC35G5	Q96KT7	338 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PPP1R36	Q96LQ0	422 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	DACH2	Q96NX9	599 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZBTB18	Q99592	522 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SLC39A3	Q9BRY0	314 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PINK1	Q9BXM7	581 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	TIGAR	Q9NQ88	270 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	RASSF1	Q9NS23	344 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ELOVL5	Q9NYP7	299 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PRDM4	Q9UKN5	801 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MCTS1	Q9ULC4	181 aa	Known RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ICAM5	Q9UMF0	924 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	VDAC3	Q9Y277	283 aa		11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GPC6	Q9Y625	555 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CSMD1	Q96PZ7	3565 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CELSR1	Q9NYQ6	3014 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ETV2	O00321	342 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF264	O43296	627 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SEC14L5	O43304	696 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	DNAJA2	O60884	412 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PABPC4L	P0CB38	370 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	TCEA1	P23193	301 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KHK	P50053	298 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CLDN20	P56880	219 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF117	Q03924	483 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PON3	Q15166	354 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GUSBP1	Q15486	140 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CD226	Q15762	336 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GSTA3	Q16772	222 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FAM174B	Q3ZCQ3	159 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SLC25A53	Q5H9E4	307 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SPANXN4	Q5MJ08	99 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SAXO2	Q658L1	398 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GTF2IRD2B	Q6EKJ0	949 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FAM214B	Q7L5A3	538 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	C16orf62	Q7Z3J2	963 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GTF2IRD2	Q86UP8	949 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZZZ3	Q8IYH5	903 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GCNT2	Q8N0V5	402 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR5W2	Q8NH69	310 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR5AK3P	Q8NH89	298 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FNDC9	Q8TBE3	224 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PIWIL2	Q8TC59	973 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NUDT8	Q8WV74	236 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	STARD4	Q96DR4	205 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OTUB1	Q96FW1	271 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ADGRG7	Q96K78	797 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MRGPRX4	Q96LA9	322 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF350	Q9GZX5	532 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SAP130	Q9H0E3	1048 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GP6	Q9HCN6	339 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	DNAJB12	Q9NXW2	375 aa	Known RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GALNT8	Q9NY28	637 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NDRG3	Q9UGV2	375 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	LIPT1	Q9Y234	373 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GPR45	Q9Y5Y3	372 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KCNE3	Q9Y6H6	103 aa		11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MAP1A	P78559	2803 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CSMD2	Q7Z408	3487 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SERINC4	A6NH21	518 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	EIF1AY	O14602	144 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SYNGR4	O95473	234 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	IL6	P05231	212 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PGR	P06401	933 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ALDOC	P09972	364 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	UBL4A	P11441	157 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	IL11	P20809	199 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	EPHA3	P29320	983 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KIR2DL2	P43627	348 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	AGFG1	P52594	562 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PHC1	P78364	1004 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PDCD4	Q53EL6	469 aa	Known RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SPNS3	Q6ZMD2	512 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MSANTD1	Q6ZTZ1	278 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GATS	Q8NAP1	163 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR5D16	Q8NGK9	328 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR5M1	Q8NGP8	315 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR10D3	Q8NH80	312 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR2V1	Q8NHB1	315 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MGARP	Q8TDB4	240 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	GPR119	Q8TDV5	335 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FIG4	Q92562	907 aa		11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF845	Q96IR2	970 aa	Predicted RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms