RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MRPL2Q5T653 305 aaKnown RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 PRAMEF20Q5VT98 475 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 TIGD3Q6B0B8 471 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GLYATQ6IB77 296 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 DESI1Q6ICB0 168 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 CBLL1Q75N03 491 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GALNTL5Q7Z4T8 443 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GALNT10Q86SR1 603 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 PLCZ1Q86YW0 608 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 SULF2Q8IWU5 870 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 RNF148Q8N7C7 305 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 CATSPER1Q8NEC5 780 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 LZICQ8WZA0 190 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 TAMM41Q96BW9 452 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ARSGQ96EG1 525 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 LAT2Q9GZY6 243 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 QRSL1Q9H0R6 528 aaKnown RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 UBQLN3Q9H347 655 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 PIF1Q9H611 641 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 GALNT9Q9HCQ5 603 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ZFP64Q9NPA5 681 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 DCAF13Q9NV06 445 aaKnown RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 ADPRHL2Q9NX46 363 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 B4GALT7Q9UBV7 327 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 RPS6KA6Q9UK32 745 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 USP22Q9UPT9 525 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 SAMD4AQ9UPU9 718 aaKnown RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 KMT2BQ9UMN6 2715 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-203ENST00000580986 CNTRLQ7Z7A1 2325 aa9.49□□□□□ -0.89
CCDC47-203ENST00000580986 A0A087WZY1 265 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 NPIPA5A0A0B4J1W7 369 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 C7orf72A4D263 438 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 LRRC3CA6NJW4 275 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 AQP12BA6NM10 295 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 NPIPA7E9PJI5 369 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ACOT7O00154 380 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ARPC2O15144 300 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 FMO6PO60774 539 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 CBR3O75828 277 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 SORBS2O94875 1100 aaKnown RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 RASAL1O95294 804 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 STAMBPO95630 424 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 LGI1O95970 557 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 F10P00742 488 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 NPIPA8P0DM63 369 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 CD247P20963 164 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 AQP1P29972 269 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 MASP1P48740 699 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 SELENOWP63302 87 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 PLAURQ03405 335 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 DMTNQ08495 405 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 DUSP7Q16829 419 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 GLYR1Q49A26 553 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 BICRALQ6AI39 1079 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF550Q7Z398 422 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 MARCH3Q86UD3 253 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 SLC22A16Q86VW1 577 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 AQP12AQ8IXF9 295 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 WDSUB1Q8N9V3 476 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 FAM156AQ8NDB6 213 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 OR1J4Q8NGS1 313 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 PHOSPHO1Q8TCT1 267 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 FIG4Q92562 907 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 NSMCE2Q96MF7 247 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 HES7Q9BYE0 225 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 TRIM15Q9C019 465 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 POLR2J2Q9GZM3 115 aaKnown RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 PCDHAC1Q9H158 963 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 POLR2J3Q9H1A7 115 aaKnown RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF703Q9H7S9 590 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 PTGES2Q9H7Z7 377 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ZDHHC11Q9H8X9 412 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 KLHL28Q9NXS3 571 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
CCDC47-203ENST00000580986 PPP4R1LQ9P1A2 415 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 EGFL7Q9UHF1 273 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 SLC7A8Q9UHI5 535 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ANAPC2Q9UJX6 822 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 ICAM5Q9UMF0 924 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 C15orf41Q9Y2V0 281 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 CHST2Q9Y4C5 530 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 EML6Q6ZMW3 1958 aa9.48□□□□□ -0.89
CCDC47-203ENST00000580986 TLN1Q9Y490 2541 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ANKUB1A6NFN9 424 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TMEM229AB2RXF0 380 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 GTPBP1O00178 669 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 SUV39H1O43463 412 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 HCRTR2O43614 444 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 RRP9O43818 475 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 SCO2O43819 266 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 PDE5AO76074 875 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 CRYABP02511 175 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 FESP07332 822 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 UQCRBP14927 111 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TCN1P20061 433 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms