RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 ANKRD34AQ69YU3 496 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 YTHDF3Q7Z739 585 aaKnown RBP12.16□□□□□ -0.46
PGAP3-207ENST00000580898 LILRA2Q8N149 483 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 BANPQ8N9N5 519 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 FNDC5Q8NAU1 212 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 TMEM171Q8WVE6 324 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 OSTF1Q92882 214 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 CDS1Q92903 461 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 C16orf58Q96GQ5 468 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 TACO1Q9BSH4 297 aaKnown RBP12.16□□□□□ -0.46
PGAP3-207ENST00000580898 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 CXorf56Q9H5V9 222 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 TMEM185BQ9H7F4 350 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 GP6Q9HCN6 339 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 CLEC4AQ9UMR7 237 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 GPC6Q9Y625 555 aaPredicted RBP12.16□□□□□ -0.46
PGAP3-207ENST00000580898 MED12LQ86YW9 2145 aa12.16□□□□□ -0.46
PGAP3-207ENST00000580898 MED12Q93074 2177 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 GTPBP1O00178 669 aaKnown RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 CFLARO15519 480 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 PEX11AO75192 247 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 CHRNGP07510 517 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 LINGO3P0C6S8 592 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 PRPS1L1P21108 318 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 PSMA4P25789 261 aaKnown RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 AGTR1P30556 359 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 SFTPDP35247 375 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 ZNF239Q16600 458 aaKnown RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 DCST2Q5T1A1 773 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 STAC2Q6ZMT1 411 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 ZAR1Q86SH2 424 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 KRTAP1-3Q8IUG1 177 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 STEAP2Q8NFT2 490 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 OR7A2PQ8NGA2 310 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 AGR3Q8TD06 166 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 SFXN5Q8TD22 340 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 OTUB1Q96FW1 271 aaPredicted RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 PERPQ96FX8 193 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 MARK4Q96L34 752 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 Q96MF0 132 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 GSX2Q9BZM3 304 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 ACTR6Q9GZN1 396 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 NGBQ9NPG2 151 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 SIRT3Q9NTG7 399 aaPredicted RBP12.15□□□□□ -0.46
PGAP3-207ENST00000580898 ACTL7BQ9Y614 415 aa12.15□□□□□ -0.46
PGAP3-207ENST00000580898 ZNF469Q96JG9 3925 aaPredicted RBP12.15□□□□□ -0.47
PGAP3-207ENST00000580898 NF1P21359 2839 aa12.15□□□□□ -0.47
PGAP3-207ENST00000580898 ABCA4P78363 2273 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 MPDZO75970 2070 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 A0A0J9YW62 118 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 DUXAA6NLW8 204 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 TMEM233B4DJY2 109 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 OPN1LWP04000 364 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 NUDT17P0C025 328 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 PSMB1P20618 241 aaKnown RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 SLC7A1P30825 629 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ATP12AP54707 1039 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ZNF117Q03924 483 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 FOXF1Q12946 379 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 CD226Q15762 336 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 XKR7Q5GH72 579 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 EXOSC6Q5RKV6 272 aaKnown RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 WFDC8Q8IUA0 241 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ZNF614Q8N883 585 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 PSMA8Q8TAA3 256 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 RNF128Q8TEB7 428 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 MECRQ9BV79 373 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ROPN1BQ9BZX4 212 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 BHLHE41Q9C0J9 482 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 C12orf49Q9H741 205 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 ROPN1Q9HAT0 212 aaPredicted RBP12.14□□□□□ -0.47
PGAP3-207ENST00000580898 FBXO34Q9NWN3 711 aa12.14□□□□□ -0.47
PGAP3-207ENST00000580898 SETD2Q9BYW2 2564 aaPredicted RBP12.13□□□□□ -0.47
PGAP3-207ENST00000580898 H7C1Q1 480 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 ZNF195O14628 629 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 PRKD3O94806 890 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
PGAP3-207ENST00000580898 AK1P00568 194 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 LAMP1P11279 417 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 IL32P24001 234 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 SOAT1P35610 550 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 SELENBP1Q13228 472 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 CBFBQ13951 182 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 PTGR1Q14914 329 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 C6orf136Q5SQH8 315 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 IL23RQ5VWK5 629 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 FCRLAQ7L513 359 aa12.13□□□□□ -0.47
PGAP3-207ENST00000580898 TMCO5AQ8N6Q1 288 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms